Gene omics information

Query gene ID At4g25030
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3235.7At4g25030828606unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFS.X.H.G.
0.6781.6At2g23320816864WRKY15Encodes WRKY DNA-binding protein 15 (WRKY15).S.X.H.G.
0.5065.3At5g18490831967unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMBOS.X.H.G.
0.3338.1At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
0.3133.8At1g08930837414ERD6 (EARLY RESPONSE TO DEHYDRATION 6)encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
30.799.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
30.099.7GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
28.899.7GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
27.499.7GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
26.499.7GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
25.099.6GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
22.499.6GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
21.599.6GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.079e-652At5g45410834577unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.035e-136At4g30860829210SDG4 (SET DOMAIN GROUP 4)Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects.C.G.S.X.
0.025e-136At4g28230828938unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVC.G.S.X.
0.015e-136At3g24480822038leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;PMOBFVAC.G.S.X.
0.025e-136At3g17000820956UBC32 (ubiquitin-conjugating enzyme 32)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFOPVC.G.S.X.
0.015e-136At2g34360817999antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.238e-1375Glycine maxGma.7029.1.S1_atCD404616--9e-13At4g25030unknown proteinC.G.S.X.
0.036e-238Hordeum vulgareContig4280_atContig4280--1e-2At5g45410unknown proteinC.G.S.X.
0.077e-859Oryza sativaOs10g0580900AK072734.1-Conserved hypothetical protein5e-8At4g25030unknown proteinC.G.S.X.
0.235e-1169Populus trichocarpaPtp.4369.1.S1_s_atBU809437hypothetical protein-4e-11At4g25030unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTa.4283.1.S1_a_atCD865796--2e-1At4g25030unknown proteinC.G.S.X.
0.164e-857Vitis vinifera1615923_atCA814782hypothetical protein LOC100259846-8e-8At4g25030unknown proteinC.G.S.X.
0.032e-136Zea maysZm.5048.9.S1_atAI600956hypothetical protein LOC100191158-1e-5At5g45410unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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