Gene omics information

Query gene ID At4g24700
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g24700828572unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
1.00100.0At2g21195816656unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;PS.X.H.G.
0.9697.3At1g15080838072LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.S.X.H.G.
0.9697.3At2g38880818472NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance.S.X.H.G.
0.9697.3At1g07970837312unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOBS.X.H.G.
0.9396.4At3g62330825406zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVS.X.H.G.
0.9396.4At4g01570828133pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMBAS.X.H.G.
0.9396.4At4g19400827681actin bindingF:actin binding;P:cytoskeleton organization;C:actin cytoskeleton;POS.X.H.G.
0.9396.4At5g18570831975GTP1/OBG family proteinF:GTP binding, nucleotide binding;P:unknown;C:intracellular, chloroplast;BOMFAPVS.X.H.G.
0.9296.0At2g20740816603-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane;POS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2692.9100.0GSM133757Lindsey_1-8_heart-stage-cotyledon_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.499.4GSM142663NE001_ATH1_A1-Evans-w20GSE6154Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
13.799.4GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
11.999.3GSM142666NE001_ATH1_A4-Evans-m20GSE6154Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
11.299.2GSM133833Walters_A-12-Kruger-MH3_REP3GSE5737Carbohydrate- and redox-regulation of gene expression in a TPT mutant
11.199.2GSM131255AtGen_6-0611_Control-Shoots-24.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)
10.399.2GSM131468AtGen_6-9612_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.033e-342At5g53290835410CRF3 (CYTOKININ RESPONSE FACTOR 3)encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.C.G.S.X.
0.013e-342At3g18110821336EMB1270 (embryo defective 1270)F:unknown;P:embryonic development ending in seed dormancy;C:chloroplast;POMFBAC.G.S.X.
0.031e-240At5g53090835389binding / catalytic/ oxidoreductaseF:oxidoreductase activity, binding, catalytic activity;P:multicellular organismal development, metabolic process;C:cellular_component unknown;BOMFPAC.G.S.X.
0.021e-240At5g50970835170WD-40 repeat family proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPC.G.S.X.
0.041e-240At5g59000836017zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBAC.G.S.X.
0.011e-240At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAC.G.S.X.
0.021e-240At5g51770835251protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;PMOFBVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.057e-238Glycine maxGmaAffx.85644.1.A1_atCA938743--6e-2At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.067e-340Hordeum vulgareHF21N04r_atHF21N04r--2e+0At4g19150ankyrin repeat family proteinC.G.S.X.
0.064e-136Oryza sativaOsAffx.22184.1.S1_at---0C.G.S.X.
0.047e-238Populus trichocarpaPtpAffx.20179.2.S1_atCK106413hypothetical protein-1e+0At1g16240SYP51 (SYNTAXIN OF PLANTS 51)C.G.S.X.
0.052e-136Triticum aestivumTaAffx.71195.1.S1_atBE492326--1e-2At2g40830RHC1AC.G.S.X.
0.046e-236Vitis vinifera1608002_s_atCF209324hypothetical protein LOC100259302-4e+0At3g13229unknown proteinC.G.S.X.
0.054e-134Zea maysZmAffx.283.1.A1_atAI670414--3e+0At3g23175lesion inducing protein-relatedC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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