Gene omics information

Query gene ID At4g24540
Gene name AGL24 (AGAMOUS-LIKE 24)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At4g24540828556AGL24 (AGAMOUS-LIKE 24)Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.S.X.H.G.
0.6075.7At2g42610818861LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.5773.8At3g23290821908--S.X.H.G.
0.5065.3At3g23295---S.X.H.G.
0.2014.4At1g74890843828ARR15 (RESPONSE REGULATOR 15)Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment.S.X.H.G.
0.030.6At4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
474.4100.0GSM158702HY213-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible system
110.099.9E-MEXP-1443-raw-cel-1581869573
81.499.9GSM158705HY213-ESTRADIOL-REP2GSE6954Identification of AGL24 downstream genes by using XVE inducible system
54.599.8E-MEXP-1443-raw-cel-1581869515
44.299.8GSM242957Mock day 3 (day3E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
36.399.7GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
35.099.7GSM242962Mock day 7 (day7E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
33.699.7GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
33.499.7GSM242961Mock day 7 (day7E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
33.199.7E-MEXP-682-raw-cel-922397577
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.234e-1995At2g22540816787SVP (SHORT VEGETATIVE PHASE)Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.C.G.S.X.
0.072e-1169At2g45650819173AGL6 (AGAMOUS-LIKE 6)sequence suggests this encodes a MADS-box transcription factorC.G.S.X.
0.113e-756At5g60910836212AGL8 (agamous-like 8)MADS box gene negatively regulated by APETALA1C.G.S.X.
0.123e-756At4g11880826795AGL14 (agamous-like 14)AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.C.G.S.X.
0.063e-756At1g24260839040SEP3 (SEPALLATA3)Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.C.G.S.X.
0.071e-654At5g15800831436SEP1 (SEPALLATA1)Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.185e-446Glycine maxGmaAffx.9006.2.S1_atBG789532--2e-4At4g24540AGL24 (AGAMOUS-LIKE 24)C.G.S.X.
0.033e+032Hordeum vulgareContig2198_atContig2198--3e-6At1g24260SEP3 (SEPALLATA3)C.G.S.X.
0.041e-242Oryza sativaOsAffx.12827.1.S1_at---0C.G.S.X.
0.172e-28127Populus trichocarpaPtp.2578.1.S1_atAY501392.1MADS9, AGL24 mads-box transcription factor-2e-28At4g24540AGL24 (AGAMOUS-LIKE 24)C.G.S.X.
0.054e-446Triticum aestivumTaAffx.143995.17.A1_atAY188331--1e-3At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.154e-1373Vitis vinifera1619977_atBQ794993hypothetical protein LOC100251508-3e-27At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.046e-134Zea maysZm.13833.1.A1_atCF649598Zea mays MADS6 /// Zea mays MADS7-4e-5At3g61120AGL13 (AGAMOUS-LIKE 13)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010076The process by which an organism retains a population of floral meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.
XGO:0010582The process by which a floral meristem becomes determinate (i.e. ceases to produce lateral organs and may or may not terminally differentiate).
XGO:0048438The process whose specific outcome is the progression of a floral whorl over time, from its formation to the mature structure. A floral whorl is a circular arrangement of parts of a flower arising from a stem of a plant.
XGO:0048510The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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