Gene omics information

Query gene ID At4g24160
Gene name hydrolase, alpha/beta fold family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5974.7At4g24160828516hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOMFPAS.X.H.G.
0.8391.4At4g17500827464ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.7083.5At1g80840844423WRKY40Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.S.X.H.G.
0.7083.5At1g76600843993unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:nucleolus, nucleus;PS.X.H.G.
0.6982.9At3g28340822462GATL10 (Galacturonosyltransferase-like 10)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
0.6882.2At2g30040817555MAPKKK14member of MEKK subfamilyS.X.H.G.
0.6781.6At5g59820836103RHL41 (RESPONSIVE TO HIGH LIGHT 41)Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.S.X.H.G.
0.6680.1At1g23710838981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBS.X.H.G.
0.6478.9At5g14730831325unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
0.6277.3At4g17615827481CBL1 (CALCINEURIN B-LIKE PROTEIN 1)Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
123.799.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
91.199.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
83.599.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
78.999.9GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
70.999.9GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
67.799.9E-MEXP-1443-raw-cel-1581869745
67.699.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
66.899.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
65.899.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
58.299.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At2g45730819181eukaryotic initiation factor 3 gamma subunit family proteinF:translation initiation factor activity;P:translational initiation, regulation of translational initiation;C:cellular_component unknown;MFOPC.G.S.X.
0.036e-136At1g75840843917ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.C.G.S.X.
0.013e+034At5g55280835621FTSZ1-1Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.C.G.S.X.
0.023e+034At5g03170831914FLA11F:unknown;P:unknown;C:anchored to membrane;PBOMAFC.G.S.X.
0.013e+034At5g19820832102emb2734 (embryo defective 2734)F:lyase activity, binding;P:embryonic development ending in seed dormancy;C:cell wall, phycobilisome;MFOPC.G.S.X.
0.023e+034At5g12020831075HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMC.G.S.X.
0.013e+034At3g60160825186ATMRP9member of MRP subfamilyC.G.S.X.
0.013e+034At3g01015821318-F:unknown;P:unknown;C:unknown;PMOFC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.283e-1687Glycine maxGmaAffx.90936.1.A1_s_atCF806661--1e-16At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
0.342e-2099Hordeum vulgareContig12512_atContig12512--4e-20At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
0.335e-37157Oryza sativaOs09g05202009637.m02967-Alpha/beta hydrolase family protein2e-37At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
0.401e-70268Populus trichocarpaPtpAffx.80839.1.S1_atCV267772hypothetical protein-7e-60At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
0.257e-1065Triticum aestivumTa.26236.1.A1_atCD453043--6e-10At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
0.266e-1787Vitis vinifera1615803_s_atCB983064hypothetical protein LOC100267776-1e-16At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
0.333e-35149Zea maysZm.10271.1.S1_atCA452443abhydrolase domain-containing protein 5-9e-35At4g24160hydrolase, alpha/beta fold family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage