Gene omics information

Query gene ID At4g24000
Gene name ATCSLG2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.146.8At4g24000828500ATCSLG2encodes a protein similar to cellulose synthaseS.X.H.G.
0.4050.8At1g09500837475cinnamyl-alcohol dehydrogenase family / CAD familysimilar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenaseS.X.H.G.
0.4050.8At2g45570819165CYP76C2member of CYP76CS.X.H.G.
0.4050.8At4g18980827634unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2522.6At3g10320820194transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PMOBFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
309.7100.0GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
274.3100.0GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
248.9100.0GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
196.0100.0GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
138.099.9GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
112.999.9GSM268245dor-drought-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
96.199.9GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
82.899.9GSM131300AtGen_6-2512_Osmoticstress-Shoots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
79.899.9GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)
72.499.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.780956At4g24010828501ATCSLG1encodes a protein similar to cellulose synthaseC.G.S.X.
0.760878At4g23990828499ATCSLG3encodes a protein similar to cellulose synthaseC.G.S.X.
0.017e-240At5g36690833634-AT5G36690 and AT5G36780 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.C.G.S.X.
0.017e-240At5g36780833645-AT5G36780 and AT5G36690 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.C.G.S.X.
0.013e-138At5g40000833997AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.013e-138At5g43840834406AT-HSFA6Amember of Heat Stress Transcription Factor (Hsf) familyC.G.S.X.
0.013e-138At1g34370840339STOP1 (sensitive to proton rhizotoxicity 1)Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.C.G.S.X.
0.011e+036At5g64790836600glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-450Glycine maxGmaAffx.49842.1.S1_atBG237217--2e-5At4g24000ATCSLG2C.G.S.X.
0.015e-136Hordeum vulgareContig88_x_atContig88--4e+0At5g44610MAP18 (Microtubule-associated Protein 18)C.G.S.X.
0.015e-138Oryza sativaOsAffx.13409.1.S1_at---0C.G.S.X.
0.097e-1273Populus trichocarpaPtpAffx.86652.1.S1_atDN486460hypothetical protein-5e-13At4g23990ATCSLG3C.G.S.X.
0.011e+036Triticum aestivumTaAffx.50864.1.S1_x_atCA734500--7e+0At5g54215-C.G.S.X.
0.028e-238Vitis vinifera1607069_atCB982496hypothetical protein LOC100256938-2e+0At3g58150-C.G.S.X.
0.015e-136Zea maysZm.14226.1.A1_atBM337251hypothetical protein LOC100273457-3e-2At3g20100CYP705A19C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0000271The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages.
LGO:0030244The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00021Link to KaPPA-View 4Cellulose biosynthesis
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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