Gene omics information

Query gene ID At4g23280
Gene name protein kinase, putative
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3541.6At4g23280828427protein kinase, putativeF:kinase activity;P:defense response;C:chloroplast;MPOBFVAS.X.H.G.
0.6781.6At1g51790841605kinaseF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6781.6At2g39200818505MLO12 (MILDEW RESISTANCE LOCUS O 12)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).S.X.H.G.
0.5773.8At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.114.1At5g61560836277protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
153.799.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
134.999.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.799.9GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6301451At4g23310828430receptor-like protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:defense response;C:endomembrane system;MPOBFVAC.G.S.X.
0.8501255At4g23270828426protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.560722At3g45860823729receptor-like protein kinase, putativeF:kinase activity;P:defense response;C:endomembrane system;MPOBFVAC.G.S.X.
0.420656At4g23130828412CRK5 (CYSTEINE-RICH RLK5)Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)C.G.S.X.
0.291e-117424At4g23160828415protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOFBVAC.G.S.X.
0.446e-104379At4g23140828413CRK6 (CYSTEINE-RICH RLK 6)Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)C.G.S.X.
0.282e-103377At4g23170828416EP1Induced in response to Salicylic acid.Similar to receptor-like kinase 4 and 5. NPR1, a known positive regulator of the SA signaling pathway is responsible for the SA-dependent induction and constitutive repression of EP1 gene's basal expression.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.122e-1171Glycine maxGma.17797.1.S1_atCD416100--3e-12At4g23180CRK10 (CYSTEINE-RICH RLK10)C.G.S.X.
0.055e-446Hordeum vulgareContig21140_atContig21140--1e-7At4g27300S-locus protein kinase, putativeC.G.S.X.
0.053e-861Oryza sativaOs01g0783900CA765415-Protein kinase domain containing protein6e-12At4g21390B120C.G.S.X.
0.114e-1687Populus trichocarpaPtpAffx.3261.1.S1_s_atDN491640hypothetical protein-2e-17At4g23190CRK11 (CYSTEINE-RICH RLK11)C.G.S.X.
0.021e-346Triticum aestivumTa.4696.1.S1_atBJ275186--6e-6At4g23190CRK11 (CYSTEINE-RICH RLK11)C.G.S.X.
0.042e-550Vitis vinifera1612784_atCB923182hypothetical protein LOC100257888-5e-6At4g11490protein kinase family proteinC.G.S.X.
0.011e-138Zea maysZm.9655.1.A1_atBM348132--6e-3At1g01130unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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