Gene omics information

Query gene ID At4g22870
Gene name leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g22870828386leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeF:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFMS.X.H.G.
1.00100.0At5g17220831586ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems.S.X.H.G.
0.9296.0At1g034953766646transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFS.X.H.G.
0.9296.0At4g14090827046UDP-glucoronosyl/UDP-glucosyl transferase family proteinThe At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.S.X.H.G.
0.9195.6At3g29590822623AT5MATAt3g29590 (At5MAT) encodes a malonyl-CoA:anthocyanidin 5-O-glucoside-6"-O-malonyltransferase that is coordinately expressed with a epistatic 5-O-anthocyanidin glucosyltransferase (At4g14090). The enzyme is involved in the malonylation of anthocyanins in Arabidopsis.S.X.H.G.
0.8693.1At5g42800834291DFR (DIHYDROFLAVONOL 4-REDUCTASE)dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.S.X.H.G.
0.8089.8At5g54060835489UF3GT (udp-glucose:flavonoid 3-O-glucosyltransferase)F:transferase activity, transferring glycosyl groups;P:N-terminal protein myristoylation, response to sucrose stimulus;C:cellular_component unknown;PMBVFOS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
238.9100.0GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
181.7100.0GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
178.4100.0GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
172.9100.0GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
162.699.9GSM10480lec1-1 Cotyledon Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
146.399.9GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
140.999.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
124.399.9GSM10479lec1-1 Cotyledon Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
106.299.9GSM10448WT Cotyledon Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
98.899.9GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.465e-162569At4g22880828387LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.C.G.S.X.
0.031e-240At4g327103770575ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.032e-136At5g63590836478FLS3 (FLAVONOL SYNTHASE 3)F:flavonol synthase activity;P:response to light stimulus, response to sucrose stimulus, flavonoid biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
0.033e+032At5g62610836382basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast;PFMC.G.S.X.
0.033e+032At5g16480831509tyrosine specific protein phosphatase family proteinF:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FOPBMC.G.S.X.
0.033e+032At4g34170829565kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFAC.G.S.X.
0.013e+032At3g62270825400anion exchange family proteinF:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.203e-1375Glycine maxGma.1163.1.S1_atAW423421Anthocyanidin synthase-3e-21At4g22880LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)C.G.S.X.
0.045e+030Hordeum vulgareHT09M11u_atHT09M11u--7e-1At5g14105unknown proteinC.G.S.X.
0.035e+032Oryza sativaOs02g0724200AK105206.1-Hypothetical protein2e+0At5g59570myb family transcription factorC.G.S.X.
0.102e-756Populus trichocarpaPtpAffx.9044.2.S1_atCV264096anthocyanidin synthase-3e-7At4g22870leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeC.G.S.X.
0.041e+130Triticum aestivumTaAffx.128883.2.S1_atCA599164--7e-2At4g22950AGL19 (AGAMOUS-LIKE 19)C.G.S.X.
0.138e-1061Vitis vinifera1619422_atAB073018.1--5e-20At4g22880LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)C.G.S.X.
0.041e+032Zea maysZmAffx.462.1.A1_atAI677305--3e+0At4g22870leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00061Link to KaPPA-View 4Flavonoids biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00941Link to KEGG PATHWAYFlavonoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage