Gene omics information

Query gene ID At4g22750
Gene name zinc finger (DHHC type) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At4g22750828372zinc finger (DHHC type) family proteinF:zinc ion binding;P:unknown;C:endomembrane system;MOFPS.X.H.G.
0.7586.9At2g45980819206unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At5g10450830909GRF6 (G-box regulating factor 6)Encodes a member of the 14-3-3 gene family that is a lambda isoform (14-3-3λ). Interacts with APX3 (ascorbate peroxidase) and AKR2 , suggesting a role in mediating oxidative metabolism in stress response. This protein was shown to colocalize and interact with SERK1 by which it is phosphorylated. This protein is also reported to interact with the phosphorylated form of the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.S.X.H.G.
0.5065.3At5g54540835542-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMS.X.H.G.
0.4050.8At4g02080827368ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.199.2GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
6.898.7GSM128650Underwood_1-3_Cor-10e6-24h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
6.698.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
6.098.5GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
5.598.3GSM270865Arabidopsis cell culture, 4 h_control_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
5.398.3GSM142880GW001_ATH1_A25-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
5.298.2GSM133754Turner_A-8-Turne-WT-Base2_SLDGSE5729Role of COV in vascular patterning
4.998.1GSM157318Hammond_3-8_Potassium-starved-shoot_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
4.898.0GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatments
4.798.0GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatments
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.162e-344At3g60800825251zinc finger (DHHC type) family proteinF:zinc ion binding;P:biological_process unknown;C:unknown;MOFPC.G.S.X.
0.034e-136At1g244056240799unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.014e-136At1g80830844422NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1)Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.C.G.S.X.
0.012e+034At5g18330831951U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOBVC.G.S.X.
0.012e+034At4g13030826917unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPMFOC.G.S.X.
0.012e+034At4g11380826741beta-adaptin, putativeF:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFPBAC.G.S.X.
0.022e+034At4g13690827003unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-138Glycine maxGma.3406.1.S1_atBG406559--1e-22At3g60800zinc finger (DHHC type) family proteinC.G.S.X.
0.112e-1065Hordeum vulgareContig9709_s_atContig9709--2e-7At3g60800zinc finger (DHHC type) family proteinC.G.S.X.
0.122e-1171Oryza sativaOs03g0804300AK067295.1-Huntingtin-interacting protein 146e-14At3g60800zinc finger (DHHC type) family proteinC.G.S.X.
0.182e-757Populus trichocarpaPtpAffx.211466.1.S1_atpmrna22473hypothetical protein-1e-41At3g60800zinc finger (DHHC type) family proteinC.G.S.X.
0.101e-1067Triticum aestivumTa.16822.1.S1_atCK196796--3e-12At3g60800zinc finger (DHHC type) family proteinC.G.S.X.
0.092e-652Vitis vinifera1619089_atCF209796hypothetical protein LOC100257546-4e-23At4g00840zinc ion bindingC.G.S.X.
0.104e-1271Zea maysZm.17585.1.S1_atAI467721palmitoyltransferase ZDHHC20-1e-11At4g22750zinc finger (DHHC type) family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00049Link to KaPPA-View 4Sterol Biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage