Gene omics information

Query gene ID At4g22470
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9396.4At4g22470828342protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVAS.X.H.G.
0.9296.0At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.8693.1At3g46280823773protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBOS.X.H.G.
0.7586.9At2g17740816283DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;POS.X.H.G.
0.6478.9At2g39200818505MLO12 (MILDEW RESISTANCE LOCUS O 12)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).S.X.H.G.
0.6378.1At2g19190816436FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)Receptor-like protein kinase. Involved in early defense signaling.S.X.H.G.
0.6075.7At1g51790841605kinaseF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5773.8At2g42360818837zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
118.099.9GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responses
109.799.9GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responses
105.999.9GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
96.999.9GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responses
95.499.9E-NASC-76-raw-cel-1359878976
87.599.9GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
87.599.9E-NASC-76-raw-cel-1359879158
87.499.9GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
86.099.9GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responses
82.299.9GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-344At1g25540839141PFT1 (PHYTOCHROME AND FLOWERING TIME 1)Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions.C.G.S.X.
0.031e-138At2g05910815143unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.021e-138At1g13450837905DNA binding protein GT-1F:transcription factor activity;P:regulation of transcription;C:nucleus;PMFOBC.G.S.X.
0.026e-136At5g4004083400160S acidic ribosomal protein P2 (RPP2E)F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome;MPFOABC.G.S.X.
0.016e-136At5g20490832171XIKEncodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.C.G.S.X.
0.026e-136At5g56140835713KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPBOFVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-136Glycine maxHgAffx.16279.1.S1_atCB280077--9e-2At4g22470protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.023e-136Hordeum vulgareHVSMEf0016A18r2_atHVSMEf0016A18r2--3e-1At1g32190-C.G.S.X.
0.021e+036Oryza sativaOsAffx.10361.1.S1_at---0C.G.S.X.
0.048e-136Populus trichocarpaPtpAffx.205601.1.S1_atpmrna11055hypothetical protein-7e-5At1g26240proline-rich extensin-like family proteinC.G.S.X.
0.042e+034Triticum aestivumTaAffx.62722.1.S1_atBQ607867--8e-2At1g16610SR45C.G.S.X.
0.042e-136Vitis vinifera1615789_atBQ795769--1e-3At1g26250proline-rich extensin, putativeC.G.S.X.
0.021e+034Zea maysZm.5187.1.A1_atAY104276.1hypothetical protein LOC100272983-2e-4At2g04400indole-3-glycerol phosphate synthase (IGPS)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage