CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g22100

Gene name BGLU3 (BETA GLUCOSIDASE 2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.78 88.6 At4g22100 828299 BGLU3 (BETA GLUCOSIDASE 2) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA S.X. H.G.
0.88 94.0 At5g01670 831701 aldose reductase, putative F:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPA S.X. H.G.
0.86 93.1 At4g09610 826546 GASA2 (GAST1 PROTEIN HOMOLOG 2) F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;P S.X. H.G.
0.86 93.1 At5g55750 835669 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVA S.X. H.G.
0.86 93.1 At2g19900 816509 ATNADP-ME1 (NADP-malic enzyme 1) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. S.X. H.G.
0.83 91.4 At1g27990 839692 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.83 91.4 At2g19320 816449 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.83 91.4 At1g75490 843885 DNA binding / transcription factor encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. S.X. H.G.
0.82 90.9 At3g05260 819690 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV S.X. H.G.
0.81 90.4 At5g57550 835859 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3) xyloglucan endotransglycosylase-related protein (XTR3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
384.2 100.0 GSM10456 WT Post-Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
258.4 100.0 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
225.1 100.0 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
221.5 100.0 GSM10454 WT Post-Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
193.6 100.0 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
174.5 100.0 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
171.6 100.0 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
152.9 99.9 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
132.4 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
123.2 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.73 0 714 At1g60090 842304 BGLU4 (BETA GLUCOSIDASE 4) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
0.63 4e-129 462 At5g16580 831520 BGLU2 (BETA GLUCOSIDASE 2) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPMOFA C.G. S.X.
0.46 3e-49 196 At4g27830 828896 BGLU10 (BETA GLUCOSIDASE 10) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFA C.G. S.X.
0.45 5e-39 163 At3g62750 825450 BGLU8 (BETA GLUCOSIDASE 8) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFA C.G. S.X.
0.42 1e-36 155 At4g27820 828895 BGLU9 (BETA GLUCOSIDASE 9) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:peroxisome;BOPMFA C.G. S.X.
0.36 7e-32 139 At3g62740 825449 BGLU7 (BETA GLUCOSIDASE 7) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 5e-9 63 Glycine max Gma.8450.1.S1_at AF486839.1 hydroxyisourate hydrolase - 4e-9 At4g22100 BGLU3 (BETA GLUCOSIDASE 2) C.G. S.X.
0.03 4e-1 36 Hordeum vulgare rbah29m06_s_at rbah29m06 - - 4e-1 At1g54050 17.4 kDa class III heat shock protein (HSP17.4-CIII) C.G. S.X.
0.07 4e-7 57 Oryza sativa Os05g0366800 9633.m02757 - Glycoside hydrolase, family 1 protein 2e-7 At4g22100 BGLU3 (BETA GLUCOSIDASE 2) C.G. S.X.
0.03 7e-5 50 Populus trichocarpa PtpAffx.92049.1.S1_s_at DN494710 hypothetical protein - 3e-7 At5g54570 BGLU41 (BETA GLUCOSIDASE 41) C.G. S.X.
0.05 8e-4 46 Triticum aestivum TaAffx.89472.1.S1_at CA681611 - - 1e-4 At1g02850 BGLU11 (BETA GLUCOSIDASE 11) C.G. S.X.
0.05 9e-1 34 Vitis vinifera 1621066_s_at CB009057 hypothetical protein LOC100245197 - 4e-1 At5g24860 FPF1 (FLOWERING PROMOTING FACTOR 1) C.G. S.X.
0.02 3e-1 36 Zea mays Zm.16447.1.S1_at CF348931 - - 1e+0 At5g16580 BGLU2 (BETA GLUCOSIDASE 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00412 Glycoside Hydrolase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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