CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g21900

Gene name antiporter/ drug transporter/ transporter

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At4g21900 828279 antiporter/ drug transporter/ transporter F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;MPO S.X. H.G.
0.31 33.8 At1g77420 844079 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOPFMVA S.X. H.G.
0.30 32.1 At5g02620 831855 ankyrin repeat family protein F:protein binding;P:unknown;C:plasma membrane;MOFBPVA S.X. H.G.
0.28 30.3 At5g09620 830821 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBV S.X. H.G.
0.28 30.3 At4g22580 828354 exostosin family protein F:catalytic activity;P:unknown;C:endomembrane system, membrane;POMF S.X. H.G.
0.28 30.3 At3g27300 822349 G6PD5 (glucose-6-phosphate dehydrogenase 5) F:glucose-6-phosphate dehydrogenase activity;P:response to cadmium ion, pentose-phosphate shunt, oxidative branch, glucose metabolic process;C:cytosol, chloroplast;BOMPFV S.X. H.G.
0.25 22.6 At3g10410 820205 scpl49 (serine carboxypeptidase-like 49) F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB S.X. H.G.
0.24 20.7 At1g19550 838542 dehydroascorbate reductase, putative F:glutathione dehydrogenase (ascorbate) activity;P:unknown;C:unknown;MPBOF S.X. H.G.
0.24 20.7 At3g28050 822429 nodulin MtN21 family protein F:unknown;P:biological_process unknown;C:endomembrane system, membrane;PBOAFM S.X. H.G.
0.23 19.3 At2g41900 818790 zinc finger (CCCH-type) family protein F:transcription factor activity, nucleic acid binding;P:regulation of transcription;C:unknown;MOPFBVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.2 99.8 GSM131594 ATGE_37_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
37.9 99.8 GSM131595 ATGE_37_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
35.1 99.7 E-MEXP-1246-raw-cel-1504120201
35.1 99.7 GSM131596 ATGE_37_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
32.8 99.7 E-MEXP-1246-raw-cel-1504120171
24.7 99.6 E-MEXP-1246-raw-cel-1504120231
22.4 99.6 GSM131617 ATGE_53_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
22.3 99.6 GSM268249 dor-drought-2, biological rep 2 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
21.9 99.6 E-MEXP-449-raw-cel-676423253
19.3 99.6 GSM133707 Short_1-3_ozone_Rep2_ATH1 GSE5722 Functional Genomics of Ozone Stress in Arabidopsis.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.73 0 1116 At2g16650 816166 antiporter/ drug transporter F:drug transporter activity, antiporter activity;P:multidrug transport;C:chloroplast, membrane;PMO C.G. S.X.
0.27 4e-86 319 At5g60430 836164 antiporter/ drug transporter F:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;P C.G. S.X.
0.06 1e-21 105 At2g02890 814820 F-box family protein F:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;P C.G. S.X.
0.01 4e-3 44 At2g32230 817782 pentatricopeptide (PPR) repeat-containing protein F:antiporter activity, drug transporter activity;P:multidrug transport;C:membrane;PMOF C.G. S.X.
0.02 6e-2 40 At4g21840 828272 methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein F:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAV C.G. S.X.
0.01 2e-1 38 At5g58840 836001 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.01 2e-1 38 At3g47530 823907 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF C.G. S.X.
0.01 2e-1 38 At3g22520 821823 unknown protein F:unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast, chloroplast envelope;OMBFPA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Glycine max GmaAffx.57503.2.S1_at BG316375 - - 2e-1 At1g14160 integral membrane family protein C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig5856_at Contig5856 - - 2e+0 At4g24420 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.06 2e-9 65 Oryza sativa Os.42980.1.S1_at - - - 0 C.G. S.X.
0.19 1e-9 65 Populus trichocarpa PtpAffx.204479.1.S1_s_at pmrna8793 hypothetical protein - 8e-10 At4g21900 antiporter/ drug transporter/ transporter C.G. S.X.
0.11 6e-8 59 Triticum aestivum TaAffx.122316.1.S1_at CA720400 - - 3e-8 At4g21900 antiporter/ drug transporter/ transporter C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1615022_at CF516943 - - 4e+0 At5g48920 TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7) C.G. S.X.
0.03 2e-2 40 Zea mays Zm.19003.1.A1_at CO526221 antiporter/ drug transporter/ transporter - 2e-12 At2g32230 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006855 The directed movement of drugs across a membrane into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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