Gene omics information

Query gene ID At4g21830
Gene name methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At4g21830828271methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:response to singlet oxygen;C:cellular_component unknown;OBMPFAVS.X.H.G.
0.4659.8At5g01040831877LAC8 (laccase 8)putative laccase, knockout mutant showed early floweringS.X.H.G.
0.3643.6At3g09940820155MDHAR (MONODEHYDROASCORBATE REDUCTASE)Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.S.X.H.G.
0.2522.6At1g11670837711MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAMS.X.H.G.
0.2522.6At4g37400829894CYP81F3member of CYP81FS.X.H.G.
0.2115.8At1g53180841752unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFS.X.H.G.
0.2014.4At1g16370838207OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOAS.X.H.G.
0.135.8At3g44190823541pyridine nucleotide-disulphide oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:unknown;BOFAMPS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
73.999.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
64.699.8GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
57.899.8GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
53.699.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
52.399.8GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
46.799.8GSM184489Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
43.299.8GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
43.199.8GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.999.8GSM184490Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.699.8GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.960763At4g21840828272methionine sulfoxide reductase domain-containing protein / SelR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAVC.G.S.X.
0.734e-55214At4g21850828273methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAVC.G.S.X.
0.482e-26119At4g04830825820methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAVC.G.S.X.
0.463e-1685At4g04810825818methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAVC.G.S.X.
0.404e-1581At4g04800825817methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:nucleus;OBMPFAVC.G.S.X.
0.262e-1169At4g04840825821methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;BOMPFAVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-240Glycine maxGma.12148.1.S1_atBE821047--2e-12At4g04830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
0.067e-340Hordeum vulgareContig7035_atContig7035--2e-9At4g21860MSRB2 (methionine sulfoxide reductase B 2)C.G.S.X.
0.057e+032Oryza sativaOsAffx.29836.1.S1_at---0C.G.S.X.
0.101e-344Populus trichocarpaPtp.2528.1.S1_s_atCV244260methionine sulfoxide reductase type-3e-11At4g04830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
0.061e-240Triticum aestivumTa.21264.1.S1_x_atCA624727--7e-3At4g04810methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
0.062e-238Vitis vinifera1606904_atCB978758hypothetical protein LOC100242556-2e-9At4g04830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
0.034e-134Zea maysZm.9627.1.A1_atBM334103--1e+0At4g21830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0000304A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage