Gene omics information

Query gene ID At4g21430
Gene name B160
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g21430827895B160F:protein binding, transcription factor activity, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.6277.3At2g39090818495tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;BOMAFPS.X.H.G.
0.4457.2At1g68185843147ubiquitin-relatedF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MPFOS.X.H.G.
0.4457.2At1g17070838277D111/G-patch domain-containing proteinF:nucleic acid binding;P:biological_process unknown;C:intracellular;MOPFAVS.X.H.G.
0.3948.4At3g12380820416ATARP5 (ACTIN-RELATED PROTEIN 5)Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.S.X.H.G.
0.3643.6At2g17975816309zinc finger (Ran-binding) family proteinF:binding, zinc ion binding;P:biological_process unknown;C:intracellular;PMOFS.X.H.G.
0.3439.8At3g61670825340unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PFMOBS.X.H.G.
0.3133.8At1g17930838372unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2930.3At2g30800817631HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM)Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.S.X.H.G.
0.2726.2At4g31200829247SWAP (Suppressor-of-White-APricot)/surp domain-containing proteinF:RNA binding;P:RNA processing;C:cellular_component unknown;MPFOBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
131.299.9GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
98.299.9GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
74.699.9GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
64.499.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
60.899.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
60.699.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.799.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
48.899.8GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
47.199.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.799.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-242At2g26940817235zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFC.G.S.X.
0.019e-240At5g42120834217lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.019e-240At4g222855008155ubiquitin thiolesterase/ zinc ion bindingF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOFPC.G.S.X.
0.019e-240At4g22350828330ubiquitin carboxyl-terminal hydrolase family proteinF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOFPC.G.S.X.
0.014e-138At5g63350836455unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.014e-138At5g63290836449coproporphyrinogen oxidase-relatedF:oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity;P:porphyrin biosynthetic process;C:chloroplast, cytoplasm;BOAMPC.G.S.X.
0.014e-138At5g51710835245KEA5member of Putative potassium proton antiporter familyC.G.S.X.
0.014e-138At1g80970844437XH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-138Glycine maxHgAffx.15125.1.S1_atCB281869--2e-1At5g37550unknown proteinC.G.S.X.
0.012e-138Hordeum vulgareContig6603_atContig6603--2e+0At3g29000calcium-binding EF hand family proteinC.G.S.X.
0.014e-242Oryza sativaOsAffx.27246.1.S1_at---0C.G.S.X.
0.081e-1379Populus trichocarpaPtpAffx.209729.1.S1_atpmrna19206hypothetical protein-1e-13At4g21430B160C.G.S.X.
0.014e-138Triticum aestivumTaAffx.16049.1.S1_atCD904133--2e+0At4g3920040S ribosomal protein S25 (RPS25E)C.G.S.X.
0.017e-342Vitis vinifera1612328_atCF212371hypothetical protein LOC100247770-6e+0At5g07510GRP14C.G.S.X.
0.016e-136Zea maysZm.18476.1.S1_atCO530450--4e-3At4g36630EMB2754 (EMBRYO DEFECTIVE 2754)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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