Gene omics information

Query gene ID At4g21390
Gene name B120
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9797.6At4g21390827891B120F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVAS.X.H.G.
0.6378.1At2g22880816819VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.4558.3At2g35930818166PUB23 (PLANT U-BOX 23)Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.S.X.H.G.
0.4457.2At2g38470818429WRKY33Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.S.X.H.G.
0.3948.4At4g28085828924unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.3948.4At2g26530817194AR781unknown functionS.X.H.G.
0.3643.6At3g59700825139ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE)member of Receptor kinase-like protein familyS.X.H.G.
0.3643.6At4g23190828418CRK11 (CYSTEINE-RICH RLK11)Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)S.X.H.G.
0.3439.8At4g17615827481CBL1 (CALCINEURIN B-LIKE PROTEIN 1)Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.S.X.H.G.
0.3338.1At5g61560836277protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
206.8100.0GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
188.1100.0E-MEXP-807-raw-cel-1173272948
186.3100.0GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
168.5100.0GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
156.199.9E-MEXP-1443-raw-cel-1581869863
144.799.9GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
141.299.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
139.299.9E-MEXP-1443-raw-cel-1581869921
119.199.9E-MEXP-807-raw-cel-1173273170
66.999.8E-MEXP-807-raw-cel-1173273223
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.081e-1999At4g21370827889S-locus protein kinase, putativeThe Col-0 pseudoSRKA allele contains a frameshift mutation that introduces a premature stop codon within the fourth of seven exons found in SRK genes. Its SCR sequences consist of several truncated pseudoSCR sequences, the longest of which is designated pseudoSCR1.C.G.S.X.
0.072e-1275At4g05200825868protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.052e-1171At1g65790842890ARK1 (A. THALIANA RECEPTOR KINASE 1)An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain.C.G.S.X.
0.052e-1171At1g65800842891ARK2 (A. THALIANA RECEPTOR KINASE 2)encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures.C.G.S.X.
0.056e-963At4g21410827893protein kinase family proteinF:kinase activity;P:response to abscisic acid stimulus;C:plasma membrane, vacuole;MPOBFVAC.G.S.X.
0.079e-859At4g21380827890ARK3 (A. THALIANA RECEPTOR KINASE 3)encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.C.G.S.X.
0.073e-757At4g27300828838S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
0.103e-757At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
0.021e-656At4g23260828425ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:response to abscisic acid stimulus;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.108e-654Glycine maxGmaAffx.24407.1.S1_atBF071319--1e-10At1g11330S-locus lectin protein kinase family proteinC.G.S.X.
0.073e-963Hordeum vulgareContig21140_atContig21140--1e-7At4g27300S-locus protein kinase, putativeC.G.S.X.
0.073e-1275Oryza sativaOsAffx.30177.3.S1_at---0C.G.S.X.
0.112e-1275Populus trichocarpaPtpAffx.224722.1.S1_atpmrna43534hypothetical protein-1e-12At4g21390B120C.G.S.X.
0.043e-138Triticum aestivumTa.26313.1.A1_atCD490651--9e-2At4g21390B120C.G.S.X.
0.033e-859Vitis vinifera1611358_atCD006705--9e-8At1g61370S-locus lectin protein kinase family proteinC.G.S.X.
0.066e-1375Zea maysZm.16280.1.A1_atCO527119receptor-like kinase-4e-13At4g21390B120C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
LGO:0048544The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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