Gene omics information

Query gene ID At4g20860
Gene name FAD-binding domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g20860827834FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to cyclopentenone;C:endomembrane system;BFPOAMS.X.H.G.
0.6781.6At5g64120836533peroxidase, putativeencodes a cell wall bound peroxidase that is induced by hypo-osmolarityS.X.H.G.
0.5065.3At3g54420824608ATEP3encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.S.X.H.G.
0.4050.8At3g46280823773protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBOS.X.H.G.
0.3338.1At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
72.699.9E-MEXP-807-raw-cel-1173273032
69.899.9E-MEXP-1094-raw-cel-1379507313
56.299.8GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responses
53.999.8E-MEXP-807-raw-cel-1173272948
53.099.8E-MEXP-807-raw-cel-1173272832
50.499.8GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responses
48.299.8GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responses
45.699.8GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responses
41.999.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
40.399.8GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responses
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.273e-25117At5g44360834462FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMC.G.S.X.
0.032e-1067At1g01980839296ATSEC1Amember of Reticuline oxidase-like familyC.G.S.X.
0.025e-859At5g44410834467FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMC.G.S.X.
0.021e-552At1g30700839950FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAC.G.S.X.
0.025e-550At1g26420839184FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAC.G.S.X.
0.042e-448At1g30730839953FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMC.G.S.X.
0.022e-448At1g26410839183FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cellular_component unknown;FBPOAMC.G.S.X.
0.078e-446At5g44440834471FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMC.G.S.X.
0.038e-446At1g30760839958FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+036Glycine maxGma.4687.1.S1_atAW309716--7e-4At5g44400FAD-binding domain-containing proteinC.G.S.X.
0.043e-240Hordeum vulgareContig15475_atContig15475--4e-2At4g20860FAD-binding domain-containing proteinC.G.S.X.
0.026e+034Oryza sativaOsAffx.31554.1.S1_at---0C.G.S.X.
0.065e-344Populus trichocarpaPtpAffx.225249.1.S1_atpmrna44464--2e-4At5g44360FAD-binding domain-containing proteinC.G.S.X.
0.038e-136Triticum aestivumTa.11025.1.A1_atBQ168402--4e-1At4g20860FAD-binding domain-containing proteinC.G.S.X.
0.029e-134Vitis vinifera1622062_atCB340908--3e+0At1g64355unknown proteinC.G.S.X.
0.025e+032Zea maysZm.9216.1.A1_atBM267379hypothetical protein LOC100276794-9e-2At5g44380FAD-binding domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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