Gene omics information

Query gene ID At4g20420
Gene name tapetum-specific protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g20420827790tapetum-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
1.00100.0At3g07450819933protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
1.00100.0At3g42960823352ATA1 (ARABIDOPSIS TAPETUM 1)Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.S.X.H.G.
1.00100.0At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
1.00100.0At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFS.X.H.G.
1.00100.0At4g35420829695dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAVS.X.H.G.
0.9496.7At3g13220820512ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPVS.X.H.G.
0.9496.7At1g02050839280chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOFS.X.H.G.
0.9496.7At4g14080827044MEE48 (maternal effect embryo arrest 48)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;POS.X.H.G.
0.9496.7At1g01280839470CYP703A2 (CYTOCHROME P450, FAMILY 703, SUBFAMILY A, POLYPEPTIDE 2)member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
448.5100.0E-MEXP-1592-raw-cel-1617526856
347.3100.0E-MEXP-1592-raw-cel-1617526984
330.8100.0E-MEXP-1592-raw-cel-1617526920
259.9100.0E-MEXP-1592-raw-cel-1617526824
243.9100.0E-MEXP-1592-raw-cel-1617526888
236.5100.0E-MEXP-1592-raw-cel-1617526952
186.4100.0E-MEXP-1592-raw-cel-1617526944
181.8100.0E-MEXP-1592-raw-cel-1617526848
164.7100.0E-MEXP-1592-raw-cel-1617526816
153.199.9E-MEXP-1592-raw-cel-1617526880
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.039e-444At2g43750818978OASB (O-ACETYLSERINE (THIOL) LYASE B)Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide.C.G.S.X.
0.031e-240At4g17270827441Mo25 family proteinF:binding;P:biological_process unknown;C:plasma membrane;MFPOC.G.S.X.
0.022e-136At5g44370834463PHT4Encodes an inorganic phosphate transporter (PHT4;6).C.G.S.X.
0.032e-136At4g18070827532unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.022e-136At2g38800818462calmodulin-binding protein-relatedF:calmodulin binding;P:unknown;C:cellular_component unknown;BOMFPVAC.G.S.X.
0.042e-136At2g04910815038glycosyl hydrolase family protein 17F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-238Glycine maxGmaAffx.90612.1.S1_s_atCF806337--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.063e-238Hordeum vulgareContig22852_atContig22852--6e-1At5g24250unknown proteinC.G.S.X.
0.054e-136Oryza sativaOs02g02440009630.m01370-Hypothetical protein1e-1At4g20420tapetum-specific protein-relatedC.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.202763.1.S1_atpmrna5508hypothetical protein-2e-1At2g3760060S ribosomal protein L36 (RPL36A)C.G.S.X.
0.076e-238Triticum aestivumTaAffx.58914.1.S1_atBQ161595--5e-2At4g20420tapetum-specific protein-relatedC.G.S.X.
0.061e+032Vitis vinifera1621294_atCB003395--3e-1At5g23950C2 domain-containing proteinC.G.S.X.
0.039e-236Zea maysZm.6449.1.A1_atCK370615--2e+0At2g28725unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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