Gene omics information

Query gene ID At4g20390
Gene name integral membrane family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g20390827787integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
1.00100.0At2g23540816886GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
1.00100.0At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9296.0At5g58860836003CYP86A1 (CYTOCHROME P450 86 A1)Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.S.X.H.G.
0.8894.0At2g35380818105peroxidase 20 (PER20) (P20)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBS.X.H.G.
0.8894.0At5g37690833748GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.7586.9At4g38080829964hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFAS.X.H.G.
0.7184.2At1g74460843787GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
170.3100.0GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
82.099.9GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
62.199.8E-MEXP-828-raw-cel-1156922987
54.099.8E-MEXP-828-raw-cel-1156922905
50.799.8E-MEXP-828-raw-cel-1156922891
48.699.8E-MEXP-828-raw-cel-1156922968
47.899.8E-MEXP-828-raw-cel-1156922944
47.099.8E-ATMX-1-raw-cel-1112746154
46.999.8GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with salt
44.499.8E-MEXP-828-raw-cel-1156922846
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.662e-57222At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.037e-238At2g45360819144unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.023e-136At5g55380835631membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedF:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOFC.G.S.X.
0.013e-136At4g13340826964leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;MBPOFVAC.G.S.X.
0.013e-136At3g19020821435leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBOPFVAC.G.S.X.
0.013e-136At2g27090817251unknown proteinF:unknown;P:N-terminal protein myristoylation;C:plasma membrane;PMFOVBC.G.S.X.
0.013e-136At1g53440841779leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.021e+034At4g18160827541KCO6Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.C.G.S.X.
0.031e+034At3g51910824354AT-HSFA7Amember of Heat Stress Transcription Factor (Hsf) familyC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Glycine maxGma.12494.2.S1_atBQ786664--3e-1At2g29950ELF4-L1 (ELF4-Like 1)C.G.S.X.
0.046e-444Hordeum vulgareContig15752_s_atContig15752--5e+0At1g61340F-box family proteinC.G.S.X.
0.041e-138Oryza sativaOs06g05567009634.m03437--3e-3At1g02710glycine-rich proteinC.G.S.X.
0.133e-1169Populus trichocarpaPtpAffx.99659.1.S1_atCV263736hypothetical protein-3e-11At4g20390integral membrane family proteinC.G.S.X.
0.033e-136Triticum aestivumTaAffx.85405.1.S1_atCA622987--3e-1At4g20390integral membrane family proteinC.G.S.X.
0.043e-134Vitis vinifera1608843_atCF517010hypothetical protein LOC100255290-1e-2At5g62440-C.G.S.X.
0.032e+032Zea maysZm.16796.2.A1_x_atAI734496--3e+0At2g23570MES19 (METHYL ESTERASE 19)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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