Gene omics information

Query gene ID At4g20230
Gene name terpene synthase/cyclase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g20230827770terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFOS.X.H.G.
0.5065.3At2g22920816823serine carboxypeptidase S10 family proteinF:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFBOS.X.H.G.
0.114.1At3g62040825377catalytic/ hydrolaseF:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFAS.X.H.G.
0.103.4At1g71692843497AGL12 (AGAMOUS-LIKE 12)Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.S.X.H.G.
0.103.4At1g35250840414thioesterase family proteinF:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
113.699.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
112.999.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
111.799.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.099.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
100.199.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
94.799.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
94.399.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
89.899.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
87.699.9GSM131555ATGE_3_AGSE5631AtGenExpress: Developmental series (roots)
80.699.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.790771At4g20200827766terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POFC.G.S.X.
0.680672At1g66020842915terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POBC.G.S.X.
0.583e-179628At3g29190822572lyase/ magnesium ion bindingF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POBC.G.S.X.
0.428e-32139At3g29110822559terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.311e-24115At4g20210827768terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;POC.G.S.X.
0.143e-1687At4g15870827268ATTS1encodes a putative terpene synthaseC.G.S.X.
0.344e-1583At1g48800841302terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.091e-1275At4g13280826958TPS12 (TERPENOID SYNTHASE 12)Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding.C.G.S.X.
0.142e-1171At1g48820841304terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e-240Glycine maxGmaAffx.60216.1.S1_atBM527040--9e-4At4g16740ATTPS03C.G.S.X.
0.012e+034Hordeum vulgareContig18232_atContig18232--2e+0At3g51790ATG1 (ARABIDOPSIS TRANSMEMBRANE PROTEIN G1P-RELATED 1)C.G.S.X.
0.015e-138Oryza sativaOs04g0340300AK071447.1-Terpene synthase-like domain containing protein3e-1At4g20230terpene synthase/cyclase family proteinC.G.S.X.
0.022e-242Populus trichocarpaPtpAffx.77251.1.S1_atCN518420hypothetical protein-2e-6At5g04420kelch repeat-containing proteinC.G.S.X.
0.022e-138Triticum aestivumTa.4494.3.S1_atBJ293023--2e+0At2g14070wound-responsive protein-relatedC.G.S.X.
0.011e+034Vitis vinifera1606909_atCF608589hypothetical protein LOC100244670-9e-32At5g51600PLE (PLEIADE)C.G.S.X.
0.016e+032Zea maysZmAffx.1096.1.A1_atAW090847--2e-1At3g02570MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00265Link to KaPPA-View 4Sesquiterpenoid biosynthesis
00393Link to KaPPA-View 4Monoterpenoid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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