CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g19810

Gene name glycosyl hydrolase family 18 protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.38 46.7 At4g19810 827725 glycosyl hydrolase family 18 protein F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall;BMFOVPA S.X. H.G.
0.86 93.1 At3g03530 821243 NPC4 (NONSPECIFIC PHOSPHOLIPASE C4) PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation. S.X. H.G.
0.80 89.8 At2g04460 814986 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.67 81.6 At2g32830 817844 PHT5 phosphate transporter S.X. H.G.
0.67 81.6 At3g52820 824448 PAP22 (PURPLE ACID PHOSPHATASE 22) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
194.0 100.0 GSM270866 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
132.1 99.9 GSM39192 RRE1_C2 GSE2169 rre1 and rre2 mutants
121.9 99.9 E-MEXP-791-raw-cel-1122937587
116.7 99.9 GSM39208 RRE2_C2 GSE2169 rre1 and rre2 mutants
114.4 99.9 GSM39200 Col_C2 GSE2169 rre1 and rre2 mutants
101.8 99.9 E-MEXP-791-raw-cel-1122937623
93.2 99.9 GSM39213 RRE2_Chitin3 GSE2169 rre1 and rre2 mutants
92.4 99.9 GSM39214 RRE2_Chitin4 GSE2169 rre1 and rre2 mutants
84.0 99.9 GSM39204 Col_Chitin2 GSE2169 rre1 and rre2 mutants
80.0 99.9 GSM39203 Col_Chitin1 GSE2169 rre1 and rre2 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.76 6e-146 517 At4g19820 827726 glycosyl hydrolase family 18 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;MBFOVPA C.G. S.X.
0.23 3e-33 143 At4g19750 827719 glycosyl hydrolase family 18 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA C.G. S.X.
0.18 2e-25 117 At4g19800 827724 glycosyl hydrolase family 18 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BMFOVPA C.G. S.X.
0.33 2e-22 107 At4g19720 827716 glycosyl hydrolase family 18 protein F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA C.G. S.X.
0.29 1e-20 101 At4g19760 827720 catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA C.G. S.X.
0.13 2e-13 77 At4g19770 827721 glycosyl hydrolase family 18 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA C.G. S.X.
0.21 6e-13 75 At4g19730 827717 glycosyl hydrolase family 18 protein F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA C.G. S.X.
0.17 2e-3 44 At4g19740 827718 catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 8e-1 36 Glycine max HgAffx.18707.1.S1_at CA940473 - - 2e-1 At4g19810 glycosyl hydrolase family 18 protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig14559_at Contig14559 - - 4e-1 At1g79430 APL (ALTERED PHLOEM DEVELOPMENT) C.G. S.X.
0.02 1e+0 36 Oryza sativa Os.27912.1.A1_at - - - 0 C.G. S.X.
0.19 1e-5 52 Populus trichocarpa PtpAffx.224513.1.S1_at pmrna43126 hypothetical protein - 1e-5 At4g19810 glycosyl hydrolase family 18 protein C.G. S.X.
0.02 2e+0 34 Triticum aestivum TaAffx.119036.1.A1_at BJ295354 - - 1e+0 At5g26810 pectinesterase family protein C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1621213_at CD799303 hypothetical protein LOC100244749 - 1e+0 At5g27280 zinc finger (DNL type) family protein C.G. S.X.
0.02 4e+0 32 Zea mays Zm.9110.2.A1_a_at BM334144 - - 5e+0 At4g27490 3' exoribonuclease family domain 1-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00412 Glycoside Hydrolase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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