Gene omics information

Query gene ID At4g19390
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At4g19390827680-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOPAS.X.H.G.
0.3338.1At1g22370838844AtUGT85A5 (UDP-glucosyl transferase 85A5)F:transferase activity, transferring glycosyl groups, glucuronosyltransferase activity;P:metabolic process;C:unknown;PMVBOFS.X.H.G.
0.2014.4At1g30500839929NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7)F:transcription factor activity, specific transcriptional repressor activity;P:negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFOS.X.H.G.
0.071.9At1g28230839717PUP1 (PURINE PERMEASE 1)Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.S.X.H.G.
0.071.9At1g76590843992zinc-binding family proteinF:binding;P:biological_process unknown;C:unknown;PMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
279.3100.0GSM133759Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
106.099.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
100.499.9GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
94.899.9GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
82.199.9GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
74.899.9GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
74.599.9GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
67.999.9GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
66.699.8GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
66.099.8GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.004e-136At2g17930816303binding / inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptorF:inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor;P:unknown;C:unknown;MFOPC.G.S.X.
0.022e+034At5g24930832563zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular, chloroplast;POMC.G.S.X.
0.022e+034At4g27790828892calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOBC.G.S.X.
0.016e+032Atcg01130--hypothetical proteinC.G.S.X.
0.016e+032At5g24430832514calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:N-terminal protein myristoylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.016e+032At5g58000835911-F:unknown;P:unknown;C:endoplasmic reticulum, chloroplast;MOPFVBC.G.S.X.
0.016e+032At4g17740827495C-terminal processing protease, putativeF:serine-type peptidase activity, protein binding;P:proteolysis, intracellular signaling cascade;C:thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen;OBPMC.G.S.X.
0.016e+032At4g20160827762-F:unknown;P:unknown;C:chloroplast;MOFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxGmaAffx.29226.1.S1_atBU965444--9e-1At1g10990unknown proteinC.G.S.X.
0.038e-134Hordeum vulgareContig11997_atContig11997--1e+0At4g19390-C.G.S.X.
0.023e+034Oryza sativaOs03g0797800AK059619.1-AUX/IAA protein family protein1e-1At3g15540IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)C.G.S.X.
0.076e-446Populus trichocarpaPtpAffx.1601.19.S1_atCV276738hypothetical protein-5e-4At4g19390-C.G.S.X.
0.037e+032Triticum aestivumTaAffx.113441.1.S1_atCA612309--4e+0At3g50450HR1 (HOMOLOG OF RPW8 1)C.G.S.X.
0.083e-857Vitis vinifera1619752_atBQ797745hypothetical protein LOC100266665-8e-8At4g19390-C.G.S.X.
0.021e+130Zea maysZmAffx.1168.1.S1_s_atAW600602early fruit mRNA-2e-1At5g16380unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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