Gene omics information

Query gene ID At4g18650
Gene name transcription factor-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g18650827599transcription factor-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMS.X.H.G.
0.9095.1At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
0.9095.1At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8994.6At2g19320816449unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8994.6At4g21020827849late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVAS.X.H.G.
0.8994.6At2g42560818856late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.8793.5At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.8793.5At3g05260819690short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.8693.1At3g11050820276ATFER2 (ferritin 2)F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAFS.X.H.G.
0.8693.1At2g23640816896reticulon family protein (RTNLB13)F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
402.7100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
350.1100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
334.5100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
333.9100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
324.7100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
306.9100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
296.4100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
271.9100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
226.6100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
190.2100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-240At2g44580819066protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MFPOC.G.S.X.
0.019e-238At1g61400842434S-locus protein kinase, putativeF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.013e-136At4g15096827175unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBC.G.S.X.
0.013e-136At1g12040837756LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1)encodes a a chimeric leucine-rich repeat/extensin protein that regulates root hair morphogenesis and elongation. Null mutants develop root hairs that frequently abort, swell, or branch. Gene is expressed in root hair cells and protein is specifically localized in the wall of the hair proper.C.G.S.X.
0.011e+034At5g04290830308KTF1 (KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1)F:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MOBPFVAC.G.S.X.
0.011e+034At4g22300828325SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1)encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in ArabidopsisC.G.S.X.
0.021e+034At3g24480822038leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;PMOBFVAC.G.S.X.
0.031e+034At3g53120824478VPS37-1F:unknown;P:unknown;C:ESCRT I complex;MOPFBC.G.S.X.
0.021e+034At3g04570819613DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;BPMOFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-240Glycine maxGmaAffx.70076.1.S1_atBU964854--1e-6At1g32260unknown proteinC.G.S.X.
0.023e+032Hordeum vulgareContig5530_s_atContig5530--2e+0At1g13370histone H3, putativeC.G.S.X.
0.023e+034Oryza sativaOs07g0413632NM_188154.1--4e-1At4g01580transcriptional factor B3 family proteinC.G.S.X.
0.035e-136Populus trichocarpaPtpAffx.200482.1.S1_atpmrna972hypothetical protein-5e-2At1g02405proline-rich family proteinC.G.S.X.
0.034e-136Triticum aestivumTaAffx.92806.1.A1_atBJ252530--3e-1At4g18650transcription factor-relatedC.G.S.X.
0.031e-136Vitis vinifera1616657_atCB982498hypothetical protein LOC100241809-9e-36At1g08830CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)C.G.S.X.
0.036e-134Zea maysZm.13589.1.A1_atAY107793.1--1e+0At3g0492040S ribosomal protein S24 (RPS24A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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