Gene omics information

Query gene ID At4g18375
Gene name KH domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At4g18375827566KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOS.X.H.G.
0.5673.0At5g08070830701TCP17 (TCP DOMAIN PROTEIN 17)TCP gene involved in heterochronic control of leaf differentiation.S.X.H.G.
0.4963.5At2g38570818439-F:molecular_function unknown;P:biological_process unknown;C:unknown;BPOS.X.H.G.
0.4253.9At2g19280816445pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAS.X.H.G.
0.4152.4At4g39530830107pentatricopeptide (PPR) repeat-containing proteinF:binding;P:biological_process unknown;C:unknown;POMFBAS.X.H.G.
0.4050.8At5g49390834999-F:unknown;P:unknown;C:endomembrane system;MOFBPVS.X.H.G.
0.3948.4At2g20210816540leucine-rich repeat family proteinF:protein binding;P:unknown;C:endomembrane system;MOPBFS.X.H.G.
0.3745.0At5g39710833967EMB2745 (EMBRYO DEFECTIVE 2745)F:unknown;P:embryonic development ending in seed dormancy;C:unknown;POMFBAS.X.H.G.
0.3745.0At2g18245816340unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.3541.6At1g270708395965'-AMP-activated protein kinase-relatedF:unknown;P:unknown;C:unknown;MFPOBAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
271.1100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
176.1100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
140.399.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.799.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
129.799.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
128.999.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
124.199.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.099.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
118.799.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
115.699.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.425e-73276At5g46190834661KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBC.G.S.X.
0.015e-240At1g54340841875ICDH (ISOCITRATE DEHYDROGENASE)NADP-specific isocitrate dehydrogenase (ICDH)C.G.S.X.
0.012e-138At5g02070831776protein kinase-relatedF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.012e-138At4g37190829873-F:unknown;P:protein polymerization;C:cytosol, plasma membrane;MFPOC.G.S.X.
0.012e-138At2g03370814866transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:endomembrane system;PMOBFC.G.S.X.
0.028e-136At5g59740836095UDP-galactose/UDP-glucose transporter-relatedF:galactose transmembrane transporter activity;P:unknown;C:unknown;MFPOBC.G.S.X.
0.018e-136At4g39753830132kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBOAVFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-346Glycine maxGma.7585.1.S1_atBU548386--7e-4At4g18375KH domain-containing proteinC.G.S.X.
0.022e+034Hordeum vulgareContig12013_s_atContig12013--3e+0At5g38080unknown proteinC.G.S.X.
0.014e-138Oryza sativaOs01g0190000NM_189652.1-Conserved hypothetical protein2e-3At3g21360electron carrier/ oxidoreductaseC.G.S.X.
0.111e-346Populus trichocarpaPtpAffx.209768.1.S1_atpmrna19271hypothetical protein-6e-4At4g18375KH domain-containing proteinC.G.S.X.
0.025e-240Triticum aestivumTa.8826.1.A1_atCA642754--7e-2At1g63960unknown proteinC.G.S.X.
0.036e-238Vitis vinifera1613084_atCB979577hypothetical protein LOC100261680-5e-7At5g46190KH domain-containing proteinC.G.S.X.
0.025e+032Zea maysZmAffx.795.1.A1_atAI770340--3e-3At5g46350WRKY8C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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