Gene omics information

Query gene ID At4g18050
Gene name PGP9 (P-GLYCOPROTEIN 9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6579.6At4g18050827530PGP9 (P-GLYCOPROTEIN 9)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVS.X.H.G.
0.9597.0At2g31540817712GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMS.X.H.G.
0.8994.6At3g19940821532sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAS.X.H.G.
0.8994.6At5g11820831055-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7888.6At5g26100832679unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7788.0At5g35380833499protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.7284.8At5g20340832156BG5 (beta-1,3-glucanase 5)Encodes a putative beta 1,3-glucanase.S.X.H.G.
0.7083.5At3g19690821506pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBS.X.H.G.
0.6982.9At3g15860820829unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6982.9At4g20990827846ACA4 (ALPHA CARBONIC ANHYDRASE 4)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:chloroplast thylakoid membrane;MBPOFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
474.6100.0GSM154507Arabidopsis growing pollen tubes rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
367.6100.0GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
210.8100.0E-MEXP-1443-raw-cel-1581869803
195.9100.0E-MEXP-1443-raw-cel-1581869745
143.499.9GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
119.899.9GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
111.999.9GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
111.299.9GSM311278Laser capture microdissected (LCM) peripheral endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
108.199.9GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
92.099.9GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.509e-126452At5g46540834697PGP7 (P-GLYCOPROTEIN 7)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVC.G.S.X.
0.162e-1999At3g62150825388PGP21 (P-GLYCOPROTEIN 21)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPVC.G.S.X.
0.112e-1689At4g01830826974PGP5 (P-GLYCOPROTEIN 5)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVC.G.S.X.
0.074e-1481At4g01820826951PGP3 (P-GLYCOPROTEIN 3)member of MDR subfamilyC.G.S.X.
0.155e-1067At1g02520839353PGP11 (P-GLYCOPROTEIN 11)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPVC.G.S.X.
0.199e-963At2g47000819314ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.C.G.S.X.
0.021e-759At3g28860822519ABCB19Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.C.G.S.X.
0.111e-759At1g02530839282PGP12 (P-GLYCOPROTEIN 12)F:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:integral to membrane;BOMAFPVC.G.S.X.
0.021e-450At1g27940839687PGP13 (P-GLYCOPROTEIN 13)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.067e-448Glycine maxGmaAffx.88118.1.S1_atBE474488--1e-10At1g02520PGP11 (P-GLYCOPROTEIN 11)C.G.S.X.
0.019e-136Hordeum vulgareContig2523_atContig2523--4e-93At1g07770RPS15A (ribosomal protein s15a)C.G.S.X.
0.073e-1069Oryza sativaOs05g0137200AK061521.1-ABC transporter domain containing protein1e-9At5g46540PGP7 (P-GLYCOPROTEIN 7)C.G.S.X.
0.142e-1069Populus trichocarpaPtpAffx.218500.1.S1_atpmrna34148multidrug/pheromone exporter, MDR family, ABC transporter family-1e-10At4g18050PGP9 (P-GLYCOPROTEIN 9)C.G.S.X.
0.032e-656Triticum aestivumTa.2793.1.S1_atAB055077.1multidrug resistance protein 1 homolog-3e-2At1g02530PGP12 (P-GLYCOPROTEIN 12)C.G.S.X.
0.022e+034Vitis vinifera1612049_atCD007708--2e-21At1g70610ATTAP1C.G.S.X.
0.031e-552Zea maysZm.4341.1.S1_atCK985951hypothetical protein LOC100194270-7e-7At4g01830PGP5 (P-GLYCOPROTEIN 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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