Gene omics information

Query gene ID At4g17505
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At4g17505827465unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBS.X.H.G.
0.8391.4At1g31250840013proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPBFVAS.X.H.G.
0.8089.8At3g50720824236protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.7788.0At1g11070837648-F:unknown;P:unknown;C:cellular_component unknown;MPBOFVAS.X.H.G.
0.7385.5At2g43660818968glycosyl hydrolase family protein 17F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.4761.2At5g12060831079self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
401.3100.0GSM284391Arabidopsis GPE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
309.1100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
300.2100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
295.1100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
287.0100.0GSM284390Arabidopsis GPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
278.0100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
272.4100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
224.7100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
224.3100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
222.4100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.038e-342At5g66700836803HB53Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development.C.G.S.X.
0.011e-138At5g04020830281calmodulin bindingF:calmodulin binding;P:biological_process unknown;C:plasma membrane;OMBPFAVC.G.S.X.
0.021e-138At2g20760816605protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane;MBOPFC.G.S.X.
0.015e-136At2g28100817355ATFUC1 (alpha-L-fucosidase 1)Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidaseC.G.S.X.
0.015e-136At2g45590819167protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAC.G.S.X.
0.015e-136At1g66150842930TMK1 (TRANSMEMBRANE KINASE 1)receptor-like transmembrane kinase I (TMK1)C.G.S.X.
0.012e+034Atcg01130--hypothetical proteinC.G.S.X.
0.012e+034At5g47020834748glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxPsAffx.C152000009_atPsAffx.C152000009--7e-2At2g39890PROT1 (PROLINE TRANSPORTER 1)C.G.S.X.
0.039e-134Hordeum vulgareHM08L19r_atHM08L19r--3e-2At3g09980unknown proteinC.G.S.X.
0.029e-136Oryza sativaOs01g0681400AK101033.1-Autophagy protein Apg6 family protein5e-6At3g61710autophagy protein Apg6 familyC.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.1056.1.S1_atAJ779404hypothetical protein-1e-88At4g33950OST1 (OPEN STOMATA 1)C.G.S.X.
0.032e+034Triticum aestivumTaAffx.4821.1.S1_atCA730990--1e+0At4g17505unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1618331_atCF208850hypothetical protein LOC100249945-6e-2At2g32487unknown proteinC.G.S.X.
0.032e-136Zea maysZm.13205.3.A1_atAI670579--6e-2At1g04645self-incompatibility protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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