Gene omics information

Query gene ID At4g16670
Gene name phosphoinositide binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g16670827369phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFOS.X.H.G.
0.5065.3At1g27670839659unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At5g09440830803EXL4 (EXORDIUM LIKE 4)F:molecular_function unknown;P:biological_process unknown;C:membrane;PBS.X.H.G.
0.4050.8At2g19660816485DC1 domain-containing proteinF:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOS.X.H.G.
0.4050.8At4g01680826853MYB55 (myb domain protein 55)Encodes a putative transcription factor (MYB55).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
94.599.9E-MEXP-1474-raw-cel-1593932929
82.299.9GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatments
73.899.9E-MEXP-1474-raw-cel-1593932801
63.399.8GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatments
61.999.8GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
57.599.8E-MEXP-1474-raw-cel-1593932865
55.499.8GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatments
54.099.8E-MEXP-1474-raw-cel-1593932897
53.599.8GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatments
52.699.8GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.144e-859At5g47440834792phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFC.G.S.X.
0.141e-552At4g17350827447phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFOC.G.S.X.
0.012e-138At5g54250835513ATCNGC4 (CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4)member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.C.G.S.X.
0.022e-138At5g06040830491self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.022e-138At2g29930817543F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.016e-136At5g67530836889peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinF:ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity;P:protein folding, protein ubiquitination;C:ubiquitin ligase complex;OBMFPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-136Glycine maxGmaAffx.21884.1.S1_atBE610014--1e-2At1g22300GRF10 (GENERAL REGULATORY FACTOR 10)C.G.S.X.
0.023e-136Hordeum vulgareContig11215_atContig11215--1e-3At3g11820SYP121 (SYNTAXIN OF PLANTS 121)C.G.S.X.
0.023e-138Oryza sativaOs07g0132200NM_186234.1--9e-1At5g51170unknown proteinC.G.S.X.
0.082e-552Populus trichocarpaPtpAffx.203024.1.S1_atpmrna5985hypothetical protein-6e-16At5g47440phosphoinositide bindingC.G.S.X.
0.032e-138Triticum aestivumTa.7107.3.S1_a_atCA657916--6e-2At4g16670phosphoinositide bindingC.G.S.X.
0.122e-1375Vitis vinifera1612426_atBQ798003hypothetical protein LOC100242609-1e-19At5g47440phosphoinositide bindingC.G.S.X.
0.031e+034Zea maysZm.17285.1.S1_x_atCK369332hypothetical protein LOC100272329-4e+0At1g20890unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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