Gene omics information

Query gene ID At4g16360
Gene name AMP-activated protein kinase
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g16360827331AMP-activated protein kinaseF:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOBS.X.H.G.
0.5974.7At1g25490839135RCN1 (ROOTS CURL IN NPA)One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stemS.X.H.G.
0.5974.7At1g13320837892PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)one of three genes encoding the 65 kDa regulatory subunit of protein phosphatase 2A (PP2A)S.X.H.G.
0.5873.8At5g08530830752CI51 (51 kDa subunit of complex I)F:4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH;P:mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;OBMFPAS.X.H.G.
0.5469.5At5g43940834417HOT5 (sensitive to hot temperatures 5)Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.S.X.H.G.
0.5368.6At5g09810830841ACT7 (ACTIN 7)Member of Actin gene family.Mutants are defective in germination and root growth.S.X.H.G.
0.5166.3At1g79230844264MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.S.X.H.G.
0.5065.3At5g18520831970-F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFBS.X.H.G.
0.5065.3At1g54080841846oligouridylate-binding protein, putativeF:mRNA 3'-UTR binding;P:unknown;C:plasma membrane;MPFOBS.X.H.G.
0.4963.5At1g32050840097secretory carrier membrane protein (SCAMP) family proteinF:transmembrane transporter activity;P:protein transport;C:mitochondrion, plasma membrane;MPOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
69.199.9GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination Study
65.299.8GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
24.799.6GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
22.199.6GSM128733Hennig_1-5_flowers-CK_021114_2_B_Rep2_ATH1GSE5526Transcriptional Programs of Early Reproductive Stages in Arabidopsis
21.499.6GSM67084Arabidopsis_Stigma01GSE3056Arabidopsis Pollination Study
20.699.6E-MEXP-285-raw-cel-440783335
19.799.6GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
16.599.5GSM62700arf6/arf6 ARF8/arf8 flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expression
15.499.5GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
15.099.4E-MEXP-285-raw-cel-440783273
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At5g20690832192ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.014e-136At3g42880823335leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.032e+034At5g211708322435'-AMP-activated protein kinase beta-2 subunit, putativeF:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOBC.G.S.X.
0.022e+034At4g25320828635DNA-binding protein-relatedF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
0.022e+034At3g54220824589SCR (SCARECROW)Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR.C.G.S.X.
0.032e+034At3g15440820783-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+034At3g06060819779short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.312e-1687Glycine maxGmaAffx.85577.1.S1_atBE059165--1e-16At4g16360AMP-activated protein kinaseC.G.S.X.
0.033e+032Hordeum vulgareEBro02_SQ008_C12_s_atEBro02_SQ008_C12--3e+0At4g16360AMP-activated protein kinaseC.G.S.X.
0.028e-136Oryza sativaOsAffx.15055.1.S1_at---0C.G.S.X.
0.363e-1583Populus trichocarpaPtp.760.1.A1_atCV229722hypothetical protein-4e-15At4g16360AMP-activated protein kinaseC.G.S.X.
0.044e-136Triticum aestivumTa.3840.2.S1_atCA640730--2e-5At5g211705'-AMP-activated protein kinase beta-2 subunit, putativeC.G.S.X.
0.037e+030Vitis vinifera1619778_atBQ795764--1e+1At5g37850SOS4 (SALT OVERLY SENSITIVE 4)C.G.S.X.
0.031e+130Zea maysZmAffx.633.1.A1_atAI715061--8e+0At5g13340unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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