Gene omics information

Query gene ID At4g16270
Gene name peroxidase 40 (PER40) (P40)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At4g16270827322peroxidase 40 (PER40) (P40)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.6781.6At1g03390838725transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFBS.X.H.G.
0.3846.7At2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.3338.1At4g29980829121unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.2420.7At1g02050839280chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
282.0100.0GSM131577ATGE_31_B2GSE5632AtGenExpress: Developmental series (flowers and pollen)
271.0100.0GSM131578ATGE_31_C2GSE5632AtGenExpress: Developmental series (flowers and pollen)
265.7100.0GSM131576ATGE_31_A2GSE5632AtGenExpress: Developmental series (flowers and pollen)
236.4100.0GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
211.5100.0E-MEXP-1592-raw-cel-1617526856
159.599.9E-TABM-63-raw-cel-681137087
145.799.9E-MEXP-1592-raw-cel-1617526984
145.699.9E-MEXP-1592-raw-cel-1617526920
145.299.9E-TABM-63-raw-cel-681137160
144.599.9E-MEXP-1592-raw-cel-1617526888
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.061e-1171At5g19890832111peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:nucleus, cytoplasm;PFOBC.G.S.X.
0.051e-1171At4g08770826447peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFC.G.S.X.
0.051e-1171At4g08780826448peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFMC.G.S.X.
0.051e-1171At1g49570841381peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.061e-1171At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
0.052e-1067At3g50990824263electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
0.034e-859At5g66390836771peroxidase 72 (PER72) (P72) (PRXR8)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.074e-859At1g68850843218peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
0.041e-757At3g32980823067peroxidase 32 (PER32) (P32) (PRXR3)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall, vacuole, membrane;PFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-446Glycine maxGmaAffx.8712.1.S1_atAW349107--1e-11At5g05340peroxidase, putativeC.G.S.X.
0.041e+034Hordeum vulgareContig18641_atContig18641--5e-4At1g68850peroxidase, putativeC.G.S.X.
0.105e-654Oryza sativaOs08g0302000AK106760.1-Peroxidase 40 precursor (EC 1.11.1.7) (AtperoxP40)3e-6At4g16270peroxidase 40 (PER40) (P40)C.G.S.X.
0.133e-1273Populus trichocarpaPtpAffx.224596.1.S1_atpmrna43279hypothetical protein-2e-12At4g16270peroxidase 40 (PER40) (P40)C.G.S.X.
0.056e-446Triticum aestivumTaAffx.112963.1.S1_atCA619392--1e+0At5g66390peroxidase 72 (PER72) (P72) (PRXR8)C.G.S.X.
0.034e-238Vitis vinifera1614361_atCD799499hypothetical protein LOC100242338-3e-8At2g22420peroxidase 17 (PER17) (P17)C.G.S.X.
0.031e-654Zea maysZm.404.1.S1_atAF037033.1anionic peroxidase H-8e-3At5g66390peroxidase 72 (PER72) (P72) (PRXR8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00413Link to KaPPA-View 4Peroxidase, class III



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00360Link to KEGG PATHWAYPhenylalanine metabolism
00680Link to KEGG PATHWAYMethane metabolism
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
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