Gene omics information

Query gene ID At4g16210
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At4g16210827314ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPAS.X.H.G.
0.8089.8At3g45310823669cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAFS.X.H.G.
0.8089.8At5g42890834300SCP2 (STEROL CARRIER PROTEIN 2)F:sterol carrier activity, oxidoreductase activity;P:glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination;C:peroxisome;MFOPBS.X.H.G.
0.8089.8At5g56260835725dimethylmenaquinone methyltransferase family proteinF:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFMS.X.H.G.
0.7385.5At3g06860819870MFP2 (MULTIFUNCTIONAL PROTEIN 2)Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.699.9GSM133317RIKEN-LI4AGSE5701AtGenExpress: Basic hormone treatment of seeds
86.799.9GSM133311RIKEN-LI1AGSE5701AtGenExpress: Basic hormone treatment of seeds
76.799.9GSM133319RIKEN-LI5AGSE5701AtGenExpress: Basic hormone treatment of seeds
67.999.9GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seeds
67.599.8GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibition
65.999.8GSM133313RIKEN-LI2AGSE5701AtGenExpress: Basic hormone treatment of seeds
65.199.8GSM133315RIKEN-LI3AGSE5701AtGenExpress: Basic hormone treatment of seeds
59.499.8GSM133312RIKEN-LI1BGSE5701AtGenExpress: Basic hormone treatment of seeds
56.899.8GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibition
55.899.8GSM133314RIKEN-LI2BGSE5701AtGenExpress: Basic hormone treatment of seeds
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-136At5g55910835689D6PK (D6 PROTEIN KINASE)D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation.C.G.S.X.
0.014e-136At3g16260820872TRZ4 (TRNASE Z 4)Encodes a tRNase Z.C.G.S.X.
0.014e-136At3g61150825287HDG1 (HOMEODOMAIN GLABROUS 1)Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.C.G.S.X.
0.014e-136At1g77500844086unknown proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;PMOFBVC.G.S.X.
0.012e+034At5g12900831130unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOBFC.G.S.X.
0.012e+034At5g62170836338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVC.G.S.X.
0.012e+034At5g63840836504RSW3 (RADIAL SWELLING 3)radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.C.G.S.X.
0.012e+034At3g48770824038ATP binding / DNA bindingF:DNA binding, ATP binding;P:biological_process unknown;C:chloroplast;PMBOFAC.G.S.X.
0.012e+034At2g31800817737ankyrin protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:unknown;MOPBFVAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-1687Glycine maxGma.12013.1.S1_atBG041653peroxisomal enoyl-CoA hydratase/isomerase family protein-8e-17At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
0.031e-550Hordeum vulgareContig10619_atContig10619--4e-5At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
0.112e-757Oryza sativaOs03g0310400AK068241.1-Enoyl-CoA hydratase/isomerase domain containingprotein1e-7At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
0.223e-24113Populus trichocarpaPtp.5363.1.S1_atCK104287hypothetical protein-3e-24At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
0.042e-654Triticum aestivumTa.1366.1.S1_atCK209068--3e-6At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
0.145e-444Vitis vinifera1613260_atCB982528hypothetical protein LOC100246523-1e-3At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
0.161e-859Zea maysZm.7779.1.A1_atCF6303853-hydroxybutyryl-CoA dehydratase-4e-8At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00077Link to KaPPA-View 4Leucine, valine and isoleucine metabolism
00079Link to KaPPA-View 4Lysine degradation
00086Link to KaPPA-View 4Tryptophan metabolism

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00071Link to KEGG PATHWAYFatty acid metabolism
00280Link to KEGG PATHWAYValine, leucine and isoleucine degradation
00310Link to KEGG PATHWAYLysine degradation
00380Link to KEGG PATHWAYTryptophan metabolism
00410Link to KEGG PATHWAYbeta-Alanine metabolism
00640Link to KEGG PATHWAYPropanoate metabolism
00650Link to KEGG PATHWAYButanoate metabolism
00903Link to KEGG PATHWAYLimonene and pinene degradation
01100Link to KEGG PATHWAYMetabolic pathways
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