Gene omics information

Query gene ID At4g15870
Gene name ATTS1
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5469.5At4g15870827268ATTS1encodes a putative terpene synthaseS.X.H.G.
0.6882.2At2g113903767808transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6176.7At3g16600820911SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinF:in 6 functions;P:unknown;C:unknown;MFBOPVAS.X.H.G.
0.5773.8At2g05400815088meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5773.8At5g35510833515unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5570.6At5g37900833769seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:nucleus, plasma membrane;MPOS.X.H.G.
0.5469.5At1g32570840151unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At1g19060838488unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At3g24640822060lyaseF:lyase activity;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5166.3At5g63340836454unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
688.8100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
214.9100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
197.6100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
186.7100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
185.1100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
183.8100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
182.3100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
175.2100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
152.099.9E-MEXP-509-raw-cel-829148525
136.799.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.142e-45184At3g29110822559terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.093e-28127At4g13280826958TPS12 (TERPENOID SYNTHASE 12)Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding.C.G.S.X.
0.112e-23111At4g13300826960TPS13 (TERPENOID SYNTHASE 13)Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding.C.G.S.X.
0.201e-21105At2g23230816855terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.093e-1997At2g37140818290terpene synthase/cyclase-relatedF:lyase activity, magnesium ion binding;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.144e-1893At4g20210827768terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;POC.G.S.X.
0.074e-1893At1g48800841302terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.143e-1687At4g20230827770terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFOC.G.S.X.
0.117e-1479At5g44630834491terpene synthase/cyclase family proteinEncodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e+034Glycine maxGmaAffx.91658.1.S1_s_atCF807383--3e-19At3g11400eukaryotic translation initiation factor 3G / eIF3gC.G.S.X.
0.012e+034Hordeum vulgareContig24736_atContig24736--9e-1At4g13380MEE56 (maternal effect embryo arrest 56)C.G.S.X.
0.012e+036Oryza sativaOs01g0713600AK109920.1-Transcriptional factor B3 family protein3e-6At3g26790FUS3 (FUSCA 3)C.G.S.X.
0.011e+036Populus trichocarpaPtpAffx.9855.1.S1_atBU891952hypothetical protein-1e+0At1g76480unknown proteinC.G.S.X.
0.022e-138Triticum aestivumTaAffx.86828.1.S1_x_atCA599972--8e-13At4g11820MVA1C.G.S.X.
0.027e-238Vitis vinifera1609244_atCB344330--2e-1At3g13445TBP1 (TATA BINDING PROTEIN 1)C.G.S.X.
0.026e+032Zea maysZmAffx.977.1.S1_atAI833949--8e-1At4g04630unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0046246The chemical reactions and pathways resulting in the formation of terpenes, any of a large group of hydrocarbons made up of isoprene units.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00265Link to KaPPA-View 4Sesquiterpenoid biosynthesis
00393Link to KaPPA-View 4Monoterpenoid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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