Gene omics information

Query gene ID At4g15390
Gene name transferase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6176.7At4g15390827205transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOS.X.H.G.
0.8089.8At4g25090828612respiratory burst oxidase, putative / NADPH oxidase, putativeF:in 7 functions;P:oxidation reduction;C:cytosolic ribosome, vacuole;MFPBOAS.X.H.G.
0.6982.9At1g13300837890myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMFS.X.H.G.
0.6478.9At2g21045816639-F:unknown;P:aging;C:unknown;BOPAFMS.X.H.G.
0.6378.1At4g15400827208transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:cellular_component unknown;PFBS.X.H.G.
0.5974.7At2g44010819006unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5873.8At2g42350818836zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.5673.0At3g21510821705AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).S.X.H.G.
0.5673.0At5g43350834353PHT1Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.S.X.H.G.
0.5166.3At3g13760820585DC1 domain-containing proteinF:protein binding, zinc ion binding;P:unknown;C:membrane;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.999.8GSM184561Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
35.799.7E-MEXP-828-raw-cel-1156922386
35.299.7GSM218593Whole roots 3.5hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
34.599.7GSM184560Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
34.099.7E-MEXP-828-raw-cel-1156922438
33.899.7GSM231194wild-type at T0, biological rep2GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
33.099.7GSM218596Whole roots 3.5hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
32.699.7GSM231201chl1 at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
32.599.7GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
31.399.7GSM231195wild-type at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.654e-104379At3g30280822728transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.283e-1273At5g47950834846transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.074e-550At1g24420839058transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.012e-138At4g34830829635-F:unknown;P:unknown;C:chloroplast;POMFBAC.G.S.X.
0.017e-136At5g62630836384HIPL2 (HIPL2 PROTEIN PRECURSOR)F:catalytic activity;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;BOPMAFC.G.S.X.
0.017e-136At3g50790824243late embryogenesis abundant protein, putative / LEA protein, putativeF:hydrolase activity, carboxylesterase activity;P:embryonic development ending in seed dormancy;C:unknown;BOMFPC.G.S.X.
0.027e-136At3g23240821902ERF1 (ETHYLENE RESPONSE FACTOR 1)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.C.G.S.X.
0.017e-136At3g05790819748LON4 (LON PROTEASE 4)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.C.G.S.X.
0.027e-136At1g20795838670F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-136Glycine maxGmaAffx.20425.1.A1_atCD412894Beta-tubulin-3e-6At5g44340TUB4C.G.S.X.
0.028e-238Hordeum vulgareEBro02_SQ006_O21_s_atEBro02_SQ006_O21--1e-2At4g10810unknown proteinC.G.S.X.
0.021e+036Oryza sativaOsAffx.14677.1.S1_at---0C.G.S.X.
0.024e+034Populus trichocarpaPtp.7716.1.S1_atDN498738--3e+0At1g76010nucleic acid bindingC.G.S.X.
0.023e+034Triticum aestivumTaAffx.12568.3.S1_atCA649670--3e+0At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.028e-134Vitis vinifera1608873_atCA815238hypothetical protein LOC100242668-4e+0At3g11400eukaryotic translation initiation factor 3G / eIF3gC.G.S.X.
0.025e+032Zea maysZm.18508.1.S1_atCO521114uclacyanin-2-5e-1At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00355Link to KaPPA-View 4Acyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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