CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g15380

Gene name CYP705A4

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.33 38.1 At4g15380 827204 CYP705A4 member of CYP705A S.X. H.G.
0.42 53.9 At1g73270 843661 scpl6 (serine carboxypeptidase-like 6) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO S.X. H.G.
0.42 53.9 At4g11230 826725 respiratory burst oxidase, putative / NADPH oxidase, putative F:in 6 functions;P:oxidation reduction;C:integral to membrane, membrane;MFPBOA S.X. H.G.
0.33 38.1 At2g28970 817446 leucine-rich repeat protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
0.29 30.3 At1g68940 843228 armadillo/beta-catenin repeat protein-related / U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;POMBFV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
75.7 99.9 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
74.1 99.9 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
68.3 99.9 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
58.6 99.8 E-MEXP-828-raw-cel-1156922905
56.3 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
51.3 99.8 GSM184483 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
49.0 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
46.5 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
44.9 99.8 GSM131381 AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
42.9 99.8 GSM260883 Yap_A2-AMF_Rep2 GSE10323 Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.80 7e-171 601 At3g20080 821548 CYP705A15 member of CYP705A C.G. S.X.
0.27 6e-51 202 At3g20120 821555 CYP705A21 member of CYP705A C.G. S.X.
0.33 8e-44 178 At2g05180 815066 CYP705A6 member of CYP705A C.G. S.X.
0.32 5e-42 173 At3g20090 821552 CYP705A18 member of CYP705A C.G. S.X.
0.24 8e-41 169 At4g15360 827202 CYP705A3 member of CYP705A C.G. S.X.
0.29 8e-41 169 At3g20960 821646 CYP705A33 member of CYP705A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 36 Glycine max GmaAffx.84302.1.S1_at AW101163 - - 2e-3 At4g15360 CYP705A3 C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HVSMEl0003N16r2_at HVSMEl0003N16r2 - - 8e+0 At3g03900 adenylylsulfate kinase, putative C.G. S.X.
0.02 6e+0 34 Oryza sativa OsAffx.30016.1.S1_at - - - 0 C.G. S.X.
0.02 2e-2 42 Populus trichocarpa PtpAffx.220981.1.S1_at pmrna37489 hypothetical protein - 2e-10 At1g05030 hexose transporter, putative C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.87142.1.S1_at CA595118 - - 1e+0 At2g13363 unknown protein C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1620384_s_at CA809883 similar to Os04g0533900 - 8e-20 At5g23760 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 1e+0 34 Zea mays Zm.15339.1.A1_at BM339205 - - 4e+0 At3g02840 immediate-early fungal elicitor family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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