CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g15350

Gene name CYP705A2

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.82 90.9 At4g15350 827201 CYP705A2 member of CYP705A S.X. H.G.
0.95 97.0 At2g23410 816873 ACPT (Arabidopsis cis-prenyltransferase) encodes cis-prenyltransferase S.X. H.G.
0.95 97.0 At2g32620 817822 ATCSLB02 encodes a gene similar to cellulose synthase S.X. H.G.
0.95 97.0 At5g15940 831451 binding / catalytic/ oxidoreductase F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA S.X. H.G.
0.93 96.4 At4g15300 827196 CYP702A2 a member of the cytochrome P450 gene family. molecular function unknown. S.X. H.G.
0.92 96.0 At2g32610 817821 ATCSLB01 encodes a gene similar to cellulose synthase S.X. H.G.
0.92 96.0 At4g15360 827202 CYP705A3 member of CYP705A S.X. H.G.
0.91 95.6 At1g47600 841169 BGLU34 (BETA GLUCOSIDASE 34) Encodes a putative myrosinase. Over-expression led to a glucosinolate profile change. S.X. H.G.
0.90 95.1 At3g20160 821560 geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative F:farnesyltranstransferase activity;P:isoprenoid biosynthetic process;C:unknown;OBFPMAV S.X. H.G.
0.90 95.1 At1g06090 837118 fatty acid desaturase family protein F:oxidoreductase activity;P:lipid metabolic process;C:cellular_component unknown;BOMFPV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
241.0 100.0 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
180.3 100.0 GSM184478 Lateral Root Cap root cells 2hr KCl control treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
177.2 100.0 GSM184484 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
173.8 100.0 GSM184480 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
155.4 99.9 GSM184483 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
149.4 99.9 GSM184481 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
135.6 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
130.4 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.1 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
128.3 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.77 0 904 At3g20950 821645 CYP705A32 member of CYP705A C.G. S.X.
0.79 0 769 At5g47990 834850 CYP705A5 encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings. C.G. S.X.
0.77 3e-148 525 At3g20940 821644 CYP705A30 a member of A-type cytochrome P450 C.G. S.X.
0.54 1e-88 327 At2g27010 817243 CYP705A9 member of CYP705A C.G. S.X.
0.59 8e-78 291 At2g27000 817242 CYP705A8 member of CYP705A C.G. S.X.
0.44 8e-75 282 At3g20090 821552 CYP705A18 member of CYP705A C.G. S.X.
0.57 2e-66 254 At2g05180 815066 CYP705A6 member of CYP705A C.G. S.X.
0.56 1e-57 224 At3g20140 821557 CYP705A23 member of CYP705A C.G. S.X.
0.49 4e-52 206 At3g20110 821554 CYP705A20 member of CYP705A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-4 48 Glycine max GmaAffx.84302.1.S1_at AW101163 - - 2e-3 At4g15360 CYP705A3 C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig21387_at Contig21387 - - 3e-1 At5g41761 unknown protein C.G. S.X.
0.02 2e+0 36 Oryza sativa OsAffx.7710.1.S1_at - - - 0 C.G. S.X.
0.05 3e-1 38 Populus trichocarpa PtpAffx.213320.1.S1_at pmrna26055 hypothetical protein - 2e-1 At4g15350 CYP705A2 C.G. S.X.
0.03 3e+0 34 Triticum aestivum TaAffx.38521.1.A1_at BJ221695 - - 1e+0 At4g15350 CYP705A2 C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1613695_at CA815439 hypothetical LOC100241660 - 1e-3 At1g11610 CYP71A18 C.G. S.X.
0.02 5e+0 32 Zea mays Zm.9430.1.A1_at BM268822 - - 2e-4 At1g71830 SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00903 Limonene and pinene degradation
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
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