Gene omics information

Query gene ID At4g15340
Gene name ATPEN1 (ARABIDOPSIS THALIANA PENTACYCLIC TRITERPENE SYNTHASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g15340827200ATPEN1 (ARABIDOPSIS THALIANA PENTACYCLIC TRITERPENE SYNTHASE 1)Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast.S.X.H.G.
0.5065.3At4g24180828519-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVS.X.H.G.
0.4355.3At1g31050839991transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.2217.5At4g15330827199CYP705A1a member of the cytochrome P450 familyS.X.H.G.
0.1912.7At3g21770821731peroxidase 30 (PER30) (P30) (PRXR9)F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
110.099.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
98.299.9GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
92.899.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
92.599.9GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
88.999.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
88.999.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
82.799.9GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
81.999.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
79.899.9GSM184498Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
75.499.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8201233At5g48010834852THAS1 (THALIANOL SYNTHASE 1)Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.C.G.S.X.
0.8201037At4g15370827203BARS1 (BARUOL SYNTHASE 1)Encodes an oxidosqualene cyclase that primarily produces the tetracyclic triterpene baruol in vitro and when expressed in yeast. It can also make 22 other minor triterpenoid products with varying numbers of rings.C.G.S.X.
0.617e-104379At5g36150833612ATPEN3 (putative pentacyclic triterpene synthase 3)F:lupeol synthase activity, catalytic activity;P:pentacyclic triterpenoid biosynthetic process;C:cellular_component unknown;BPOFMC.G.S.X.
0.658e-85315At1g78500844186pentacyclic triterpene synthase, putativeEncodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, α-amyrin and bauerenol, this enzyme was also shown to produce two seco-triterpenes: α- and β-seco-amyrin.C.G.S.X.
0.583e-44180At5g42600834267MRN1 (MARNERAL SYNTHASE)Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral.C.G.S.X.
0.052e-552At1g78950844234beta-amyrin synthase, putativeF:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMAC.G.S.X.
0.068e-550At1g78970844237LUP1 (LUPEOL SYNTHASE 1)Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation.C.G.S.X.
0.038e-550At1g78955844235CAMS1 (Camelliol C synthase 1)F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-138Glycine maxGmaAffx.39875.1.S1_atBE331706--1e-31At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
0.012e+034Hordeum vulgareHY04I22u_atHY04I22u--4e+0At4g10430-C.G.S.X.
0.029e-344Oryza sativaOs.12282.1.S1_a_at---0C.G.S.X.
0.057e-344Populus trichocarpaPtpAffx.89457.1.A1_atDN492169hypothetical protein-5e-22At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
0.023e-138Triticum aestivumTa.8826.1.A1_atCA642754--7e-2At1g63960unknown proteinC.G.S.X.
0.012e-240Vitis vinifera1614893_atCF568825--1e-3At1g78950beta-amyrin synthase, putativeC.G.S.X.
0.038e-342Zea maysZm.5697.2.S1_atAI834433--5e-25At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010263The chemical reactions and pathways resulting in the formation of tricyclic triterpenoid compounds, terpenoids with 6 isoprene units and 3 carbon rings.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00100Link to KEGG PATHWAYSteroid biosynthesis
01062Link to KEGG PATHWAYBiosynthesis of terpenoids and steroids
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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