Gene omics information

Query gene ID At4g15290
Gene name ATCSLB05
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At4g15290827195ATCSLB05encodes a gene similar to cellulose synthaseS.X.H.G.
0.8894.0At4g09990826590unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.8089.8At2g47540819367pollen Ole e 1 allergen and extensin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7788.0At1g63450842651catalyticF:catalytic activity;P:unknown;C:membrane;POMS.X.H.G.
0.7486.1At5g49270834987SHV2 (SHAVEN 2)Involved in successfully establishing tip growth in root hairs.S.X.H.G.
0.7184.2At5g15890831446unknown proteinF:unknown;P:biological_process unknown;C:unknown;PMFOVBAS.X.H.G.
0.6882.2At2g34910818056unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6378.1At1g53830841820ATPME2encodes a pectin methylesteraseS.X.H.G.
0.6378.1At1g27740839667basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOS.X.H.G.
0.6277.3At1g30850839969unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
517.3100.0GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
340.4100.0GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
295.9100.0GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
240.3100.0GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
205.7100.0GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
135.899.9GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
127.899.9GSM266669Arabidopsis, root cells, cortex, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
127.699.9GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
118.399.9GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
111.199.9GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7901376At2g32620817822ATCSLB02encodes a gene similar to cellulose synthaseC.G.S.X.
0.7901106At4g15320827198ATCSLB06 (CELLULOSE SYNTHASE LIKE B6)encodes a gene similar to cellulose synthaseC.G.S.X.
0.780932At2g32540817815ATCSLB04encodes a gene similar to cellulose synthaseC.G.S.X.
0.760904At2g32530817814ATCSLB03encodes a gene similar to cellulose synthaseC.G.S.X.
0.810741At2g32610817821ATCSLB01encodes a gene similar to cellulose synthaseC.G.S.X.
0.012e-242At1g33750840266terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.012e-242At1g55850842035ATCSLE1encodes a protein similar to cellulose synthaseC.G.S.X.
0.017e-240At5g44030834426CESA4 (CELLULOSE SYNTHASE A4)Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.C.G.S.X.
0.013e-138At1g74160843756unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+036Glycine maxGmaAffx.81399.2.S1_atBM085742--1e-6At1g55850ATCSLE1C.G.S.X.
0.012e+034Hordeum vulgareHVSMEb0011B17r2_s_atHVSMEb0011B17r2--4e+0Atmg01410-C.G.S.X.
0.012e+036Oryza sativaOsAffx.25443.1.S1_at---0C.G.S.X.
0.044e-138Populus trichocarpaPtpAffx.202490.1.S1_atpmrna4990hypothetical protein-8e-8At2g32530ATCSLB03C.G.S.X.
0.011e+036Triticum aestivumTa.25979.1.A1_atCD454189--4e+0At5g26890unknown proteinC.G.S.X.
0.019e-238Vitis vinifera1610851_atCF201108.1--3e-1At4g00870basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.012e+034Zea maysZm.5968.1.A1_atCK826729acyl carrier protein-1e-1At2g44620MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0000271The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages.
LGO:0030244The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00021Link to KaPPA-View 4Cellulose biosynthesis
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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