Gene omics information

Query gene ID At4g14400
Gene name ACD6 (ACCELERATED CELL DEATH 6)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At4g14400827085ACD6 (ACCELERATED CELL DEATH 6)encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.S.X.H.G.
0.8089.8At3g23110821886AtRLP37 (Receptor Like Protein 37)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVS.X.H.G.
0.7184.2At1g35710840475leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6781.6At3g08870820035lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6478.9At3g11010820272AtRLP34 (Receptor Like Protein 34)F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAVS.X.H.G.
0.5773.8At5g54610835550ANK (ankyrin)Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.S.X.H.G.
0.4659.8At2g46430819251ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3)cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistanceS.X.H.G.
0.3643.6At5g60900836211RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1)Encodes a receptor-like protein kinase.S.X.H.G.
0.3133.8At1g65790842890ARK1 (A. THALIANA RECEPTOR KINASE 1)An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.399.7GSM269826C2 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
27.899.7GSM142819SS002_ATH1_A11-smith-24h_repeatGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
26.399.7GSM133035CT482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
25.499.6GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
25.099.6GSM142808SS001_ATH1_A11-Smith-21BGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
23.699.6GSM142798SS001_ATH1_A1-Smith-21AGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
23.099.6GSM269828WT leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
22.399.6GSM131122AtGen_B-8_1-1-4_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
21.199.6GSM269818C2 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
20.999.6GSM269822T6 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.752e-144513At4g14390827084ankyrin repeat family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.644e-74280At4g05040825846ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.171e-40169At4g03470827915ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAC.G.S.X.
0.195e-1893At4g03480827906protein bindingF:protein binding;P:biological_process unknown;C:unknown;MOPFBVAC.G.S.X.
0.077e-859At4g03440827920ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+036Glycine maxPsAffx.psHB022xF10f_atPsAffx.psHB022xF10f--4e+0At5g61050histone deacetylase-related / HD-relatedC.G.S.X.
0.028e+032Hordeum vulgareContig21716_atContig21716--1e+1At3g27270-C.G.S.X.
0.012e+036Oryza sativaOs09g0488000AK063214.1-GCN5-related N-acetyltransferase domain containingprotein4e-1At5g42300UBL5 (UBIQUITIN-LIKE PROTEIN 5)C.G.S.X.
0.011e+036Populus trichocarpaPtpAffx.163330.1.S1_atCA824947histone acetyltransferase-8e-1At3g19590WD-40 repeat family protein / mitotic checkpoint protein, putativeC.G.S.X.
0.013e-138Triticum aestivumTaAffx.72705.1.A1_atCK163761--5e+0At3g05760nucleic acid binding / zinc ion bindingC.G.S.X.
0.013e-136Vitis vinifera1612574_s_atCF511613hypothetical protein LOC100250803-1e+0At5g18050auxin-responsive protein, putativeC.G.S.X.
0.012e+034Zea maysZmAffx.264.1.A1_atAI670392--3e+0At2g47470UNE5 (UNFERTILIZED EMBRYO SAC 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0008219The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
XGO:0009751A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
XGO:0009816A response of an organism to a bacterium that prevents the occurrence or spread of disease.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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