Gene omics information

Query gene ID At4g14290
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At4g14290827070-F:unknown;P:unknown;C:plasma membrane;OBMFPVAS.X.H.G.
0.4050.8At5g09690830828magnesium transporter CorA-like family protein (MRS2-7)F:metal ion transmembrane transporter activity;P:metal ion transport;C:membrane;PFOMBS.X.H.G.
0.3338.1At3g03120821079ATARFB1C (ADP-ribosylation factor B1C)A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster}, other ARFs and ARF-like proteins.S.X.H.G.
0.2930.3At3g47910823946ubiquitin thiolesterase/ zinc ion bindingF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOFPBAVS.X.H.G.
0.2930.3At5g08210830717MIR834aEncodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UGGUAGCAGUAGCGGUGGUAAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
176.8100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
152.699.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
143.999.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
140.299.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
131.599.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.399.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
126.099.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
109.199.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
104.099.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
103.199.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.620696At3g23540821933-F:unknown;P:unknown;C:cellular_component unknown;OBMFPAC.G.S.X.
0.055e-550At4g17150827425unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFAC.G.S.X.
0.011e-242At1g76780844012-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.002e-138At1g64790842787bindingF:binding;P:unknown;C:cytosol, nucleus, membrane;MFOPBAVC.G.S.X.
0.018e-136At5g45190834555cyclin family proteinEncodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).C.G.S.X.
0.018e-136At5g02310830916PRT6 (PROTEOLYSIS 6)Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.C.G.S.X.
0.018e-136At1g21450838743SCL1 (SCARECROW-LIKE 1)Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.231e-21105Glycine maxGmaAffx.5115.1.S1_atBM177722--4e-27At3g23540-C.G.S.X.
0.026e+032Hordeum vulgareHF13K06r_atHF13K06r--9e-1At2g25840OVA4 (ovule abortion 4)C.G.S.X.
0.143e-1481Oryza sativaOs03g0359000AK064512.1-Esterase/lipase/thioesterase domain containingprotein1e-22At3g23540-C.G.S.X.
0.053e-757Populus trichocarpaPtpAffx.205916.1.S1_atpmrna11739--3e-54At4g17150unknown proteinC.G.S.X.
0.022e-138Triticum aestivumTaAffx.38598.1.S1_atBJ216474--7e-2At1g10010AAP8C.G.S.X.
0.029e-134Vitis vinifera1620961_x_atCF202159.1--3e-4At2g18770signal recognition particle bindingC.G.S.X.
0.021e+034Zea maysZm.5835.1.S1_atAI649823hypothetical protein LOC100275314-6e-9At2g05310unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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