CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g14060

Gene name major latex protein-related / MLP-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At4g14060 827042 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.58 73.8 At3g26460 822251 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.51 66.3 At5g37990 833778 S-adenosylmethionine-dependent methyltransferase/ methyltransferase F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMF S.X. H.G.
0.37 45.0 At1g77520 844088 O-methyltransferase family 2 protein F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM S.X. H.G.
0.34 39.8 At2g01520 814681 MLP328 (MLP-LIKE PROTEIN 328) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.33 38.1 At3g58550 825024 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P S.X. H.G.
0.33 38.1 At5g38020 833781 S-adenosyl-L-methionine:carboxyl methyltransferase family protein encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) S.X. H.G.
0.30 32.1 At4g11310 826733 cysteine proteinase, putative cysteine proteinase precursor-like protein S.X. H.G.
0.29 30.3 At1g24430 839059 transferase/ transferase, transferring acyl groups other than amino-acyl groups F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PF S.X. H.G.
0.26 24.4 At5g63560 836475 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
497.0 100.0 GSM133717 Urwin_A-1-Urwin-Con_SLD GSE5724 Plant gene expression associated with susceptibility to nematodes
397.4 100.0 GSM133718 Urwin_A-2-Urwin-Inf_SLD GSE5724 Plant gene expression associated with susceptibility to nematodes
197.1 100.0 E-MEXP-791-raw-cel-1122937623
181.8 100.0 E-MEXP-791-raw-cel-1122937587
120.2 99.9 GSM131575 ATGE_99_C GSE5631 AtGenExpress: Developmental series (roots)
119.7 99.9 GSM131574 ATGE_99_B GSE5631 AtGenExpress: Developmental series (roots)
113.4 99.9 GSM131573 ATGE_99_A GSE5631 AtGenExpress: Developmental series (roots)
78.9 99.9 E-MEXP-791-raw-cel-1122937578
77.9 99.9 GSM142640 MC002_ATH1_A6.3-dubos-5kc GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
67.1 99.8 GSM142638 MC002_ATH1_A6.1-dubos-5kc_repeat GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.91 3e-167 587 At2g01520 814681 MLP328 (MLP-LIKE PROTEIN 328) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.85 1e-126 452 At2g01530 814682 MLP329 (MLP-LIKE PROTEIN 329) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.69 4e-43 174 At1g14950 838060 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.58 3e-37 155 At3g26460 822251 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.48 2e-35 149 At1g14960 838061 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.49 2e-32 139 At3g26450 822250 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.56 1e-30 133 At1g14930 838058 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.52 5e-27 121 At4g23680 828468 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.59 7e-20 97 At4g23670 828467 major latex protein-related / MLP-related F:copper ion binding;P:response to cadmium ion, response to salt stress, defense response to bacterium;C:vacuole;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Glycine max GmaAffx.40739.1.S1_at BQ253866 - - 3e+0 At5g51090 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HW01M20u_x_at HW01M20u - - 4e-2 At5g03300 ADK2 (ADENOSINE KINASE 2) C.G. S.X.
0.03 7e+0 32 Oryza sativa OsAffx.3514.1.S1_at - - - 0 C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.105423.1.S1_s_at CK105514 hypothetical protein - 8e-10 At4g01970 AtSTS (Arabidopsis thaliana stachyose synthase) C.G. S.X.
0.04 2e-1 36 Triticum aestivum TaAffx.90087.1.S1_at BQ608660 - - 3e-1 At4g14060 major latex protein-related / MLP-related C.G. S.X.
0.03 4e+0 30 Vitis vinifera 1612082_s_at CA809246 hypothetical protein LOC100258857 - 3e-17 At5g19450 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.106.1.A1_at AI665540 - - 3e+0 At4g14060 major latex protein-related / MLP-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
L GO:0009607 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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