Gene omics information

Query gene ID At4g13660
Gene name PRR2 (PINORESINOL REDUCTASE 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At4g13660827000PRR2 (PINORESINOL REDUCTASE 2)Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.S.X.H.G.
0.6781.6At5g66390836771peroxidase 72 (PER72) (P72) (PRXR8)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBS.X.H.G.
0.5773.8At2g36100818183integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At1g08670837389epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.4457.2At4g13580826991disease resistance-responsive family proteinF:molecular_function unknown;P:unknown;C:endomembrane system;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.399.9GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
62.199.8GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
60.399.8GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
49.999.8GSM184898Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
48.899.8GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
43.799.8GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.299.8GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
40.699.8GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
40.699.8GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
40.499.8GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.772e-114412At1g32100840102PRR1 (PINORESINOL REDUCTASE 1)Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.C.G.S.X.
0.031e-138At1g75280843865isoflavone reductase, putativeisoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.C.G.S.X.
0.045e-136At1g75290843866oxidoreductase, acting on NADH or NADPHencodes a protein whose sequence is similar to an isoflavone reductaseC.G.S.X.
0.015e-136At1g13800837941pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMFBAC.G.S.X.
0.022e+034At5g60220836144TET4 (TETRASPANIN4)Member of TETRASPANIN familyC.G.S.X.
0.022e+034At4g11745826780kelch repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAC.G.S.X.
0.012e+034At3g15340820765PPI2 (proton pump interactor 2)Hypothetical protein similar to PPI1, a protein that interacts with the plasma membrane H+ ATPase AHA1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.127e-446Glycine maxGmaAffx.45841.1.S1_atBI702220--4e-4At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
0.121e-963Hordeum vulgareContig12212_atContig12212--4e-8At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.101e-1585Oryza sativaOs12g0265100AK065317.1-Pinoresinol-lariciresinol reductase TH22e-16At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.164e-859Populus trichocarpaPtp.644.1.S1_atCV228278phenylcoumaran benzylic ether reductase -like protein-4e-8At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
0.139e-1271Triticum aestivumTa.1727.2.S1_atBJ255891--3e-10At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.044e-238Vitis vinifera1610853_atCF213516isoflavone reductase-like protein 1-3e-6At4g34540isoflavone reductase family proteinC.G.S.X.
0.134e-961Zea maysZm.12422.1.S1_atAW400260--9e-9At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009807The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00640Link to KEGG PATHWAYPropanoate metabolism
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