Gene omics information

Query gene ID At4g13130
Gene name DC1 domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At4g13130826927DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast envelope;PMOS.X.H.G.
0.6781.6At1g55390841986DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.6781.6At1g55700842019DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;PMOS.X.H.G.
0.6781.6At5g43040834319DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMOS.X.H.G.
0.6277.3At1g66450842963DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5773.8At1g33610840255protein bindingF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAVS.X.H.G.
0.5773.8At4g11550826759DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOS.X.H.G.
0.5065.3At3g07000819885DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOS.X.H.G.
0.4862.5At1g55380841985DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.4457.2At5g01490831754CAX4 (CATION EXCHANGER 4)Encodes a cation/proton antiporter, a member of Low affinity calcium antiporter CAX2 family.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
167.8100.0GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
149.899.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
115.799.9GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
101.799.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.699.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
90.299.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
87.599.9GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
87.399.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
84.099.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
80.899.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.281e-92341At5g03360831864DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PBOVMAC.G.S.X.
0.451e-83311At1g29180839792DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMC.G.S.X.
0.408e-82305At1g66440842962DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PFOC.G.S.X.
0.233e-78293At1g44020841002DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOMC.G.S.X.
0.212e-73278At1g44030841003DC1 domain-containing proteinF:unknown;P:unknown;C:chloroplast;PMFOBC.G.S.X.
0.337e-70266At4g26380828744DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOFC.G.S.X.
0.392e-67258At4g10560826648MEE53 (maternal effect embryo arrest 53)F:protein binding, zinc ion binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PC.G.S.X.
0.386e-64246At4g02540827919DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POMFC.G.S.X.
0.381e-58228At1g62030842498DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-138Glycine maxGmaAffx.41396.1.S1_s_atBI893750--1e+1At5g63460SAP domain-containing proteinC.G.S.X.
0.021e-138Hordeum vulgareHF21N04r_atHF21N04r--2e+0At4g19150ankyrin repeat family proteinC.G.S.X.
0.016e-138Oryza sativaOs01g0834700AK101559.1-The start codon is not identified.9e-10At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.024e-138Populus trichocarpaPtpAffx.204868.1.S1_atpmrna9623hypothetical protein-1e+0At5g45910GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.025e+034Triticum aestivumTaAffx.97775.1.A1_atCA721867--3e-1At5g49300zinc finger (GATA type) family proteinC.G.S.X.
0.021e+034Vitis vinifera1622507_atCB975105--6e-20At1g51410cinnamyl-alcohol dehydrogenase, putative (CAD)C.G.S.X.
0.015e-136Zea maysZm.12663.1.S1_atBQ703906hypothetical protein LOC100279518-3e-2At5g46720-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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