Gene omics information

Query gene ID At4g13030
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2522.6At4g13030826917unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPMFOS.X.H.G.
0.5773.8At5g44920834522Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBOS.X.H.G.
0.2930.3At1g67030843022ZFP6 (ZINC FINGER PROTEIN 6)Encodes a zinc finger protein containing only a single zinc finger.S.X.H.G.
0.1710.2At5g595308360722-oxoglutarate-dependent dioxygenase, putativeF:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFMS.X.H.G.
0.157.8At2g37750818352unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
59.899.8GSM142628MC002_ATH1_A2.3-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
59.299.8GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
55.099.8GSM142626MC002_ATH1_A2.1-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
54.999.8GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
53.899.8GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
51.699.8GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
48.999.8GSM142627MC002_ATH1_A2.2-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
46.199.8GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
44.299.8GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
40.699.8GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.015e-240At4g00230827949XSP1 (xylem serine peptidase 1)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:cell wall, plant-type cell wall;BPOFMAC.G.S.X.
0.025e-240At4g36100829766-F:unknown;P:vesicle-mediated transport, vesicle docking during exocytosis;C:peroxisome;PFOMC.G.S.X.
0.035e-240At1g15385838108unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.025e-240At1g59710842262-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.025e-240At1g47970841215unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVAC.G.S.X.
0.012e-138At5g22640832327emb1211 (embryo defective 1211)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;OMFBPVAC.G.S.X.
0.022e-138At5g03890831673unknown proteinF:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PC.G.S.X.
0.012e-138At4g01170826561unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMBFC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-550Glycine maxGmaAffx.79590.1.A1_s_atBQ299283--5e-5At3g29000calcium-binding EF hand family proteinC.G.S.X.
0.023e-136Hordeum vulgareHVSMEl0003G02r2_atHVSMEl0003G02r2--1e-3At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
0.026e-344Oryza sativaOs09g0375600AK062323.1-Protein kinase domain containing protein4e-5At1g24030protein kinase family proteinC.G.S.X.
0.036e-240Populus trichocarpaPtpAffx.202689.1.S1_atpmrna5366hypothetical protein-6e-2At4g13030unknown proteinC.G.S.X.
0.025e-240Triticum aestivumTaAffx.111818.2.S1_atCA653586--3e+0At3g01470ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)C.G.S.X.
0.039e-444Vitis vinifera1615473_atCF373077--1e-3At4g13030unknown proteinC.G.S.X.
0.021e+034Zea maysZm.9842.1.A1_atBM340816--3e-1At5g20370serine-rich protein-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage