Gene omics information

Query gene ID At4g12360
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g12360826845protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PS.X.H.G.
0.4050.8At3g45390823677lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFS.X.H.G.
0.3133.8At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.2930.3At1g63550842660-F:unknown;P:unknown;C:anchored to membrane;POVMBFAS.X.H.G.
0.2930.3At1g63580842663protein kinase-relatedEncodes a plasma membrane-localized protein with two DUF26 domains and a GPI anchor domain.S.X.H.G.
0.2930.3At4g20450827793leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.2420.7At3g46340823779leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.2319.3At1g64480842756CBL8 (CALCINEURIN B-LIKE PROTEIN 8)calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifsS.X.H.G.
0.2217.5At1g70110843347lectin protein kinase family proteinF:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.2014.4At1g26360839178MES13 (METHYL ESTERASE 13)Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
285.5100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
194.2100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
190.0100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
157.199.9GSM157305Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architecture
153.099.9GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architecture
146.599.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
142.199.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
140.799.9GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
139.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
139.299.9GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-136At5g16930831556AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OMBFPAVC.G.S.X.
0.019e-134At5g04540830333phosphatase/ protein tyrosine phosphataseF:phosphatase activity, protein tyrosine phosphatase activity;P:dephosphorylation;C:unknown;MOFPC.G.S.X.
0.019e-134At3g19300821464protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.024e+032At5g61865836308unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPAFC.G.S.X.
0.034e+032At4g37300829885MEE59 (maternal effect embryo arrest 59)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PC.G.S.X.
0.014e+032At3g141725007999-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPVAC.G.S.X.
0.024e+032At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAC.G.S.X.
0.034e+032At3g15480820787unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Glycine maxGma.11339.1.S1_atAW311583--4e-4At3g18280protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.042e+032Hordeum vulgareContig5303_atContig5303--5e+0At4g12360protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.027e+032Oryza sativaOs03g0305400AK071397.1-Universal stress protein (Usp) family protein1e-1At3g54900CXIP1 (CAX INTERACTING PROTEIN 1)C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.18742.1.A1_atCV235603autoinhibited calcium ATPase-4e+0At5g60460sec61beta family proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.105425.1.S1_atCA734627--2e+0At4g12360protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.034e+030Vitis vinifera1615425_atCF603397--1e+0At4g32860unknown proteinC.G.S.X.
0.036e+030Zea maysZm.965.1.S1_atCA828949hypothetical protein LOC100277149-3e-4At1g80890unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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