CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g12330

Gene name CYP706A7

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.55 70.6 At4g12330 826842 CYP706A7 member of CYP706A S.X. H.G.
0.50 65.3 At3g22570 821829 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.47 61.2 At2g19060 816423 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM S.X. H.G.
0.44 57.2 At2g32270 817787 ZIP3 A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency. S.X. H.G.
0.40 50.8 At3g29250 822580 copper ion binding / oxidoreductase F:oxidoreductase activity, copper ion binding;P:metabolic process;C:cellular_component unknown;BOFMPAV S.X. H.G.
0.40 50.8 At5g42590 834266 CYP71A16 putative cytochrome P450 S.X. H.G.
0.25 22.6 At1g08990 837420 PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5) F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:endomembrane system;PMFVBO S.X. H.G.
0.25 22.6 At1g72200 843552 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB S.X. H.G.
0.22 17.5 At3g45710 823713 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
245.4 100.0 GSM265433 Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
200.7 100.0 GSM184632 Arabidopsis, whole roots, 140 mM NaCl, replicate 1 GSE7636 Expression analysis of the effect of protoplasting and FACS sorting in roots
199.5 100.0 GSM184633 Arabidopsis, whole roots, 140 mM NaCl, replicate 2 GSE7636 Expression analysis of the effect of protoplasting and FACS sorting in roots
131.0 99.9 GSM265412 Arabidopsis, whole roots, -Fe, replicate 2 GSE10496 Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
109.6 99.9 GSM265413 Arabidopsis, whole roots, -Fe, replicate 3 GSE10496 Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
109.5 99.9 GSM265411 Arabidopsis, whole roots, -Fe, replicate 1 GSE10496 Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
88.6 99.9 GSM179963 Arabidopsis aux1 mutant roots, air treatment, replica 1 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
84.7 99.9 GSM184921 Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
79.6 99.9 GSM184909 Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
78.7 99.9 GSM265425 Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.52 3e-46 186 At5g44620 834490 CYP706A3 member of CYP706A C.G. S.X.
0.17 6e-20 99 At4g12300 826839 CYP706A4 member of CYP706A C.G. S.X.
0.10 3e-9 63 At4g12320 826841 CYP706A6 member of CYP706A C.G. S.X.
0.18 1e-5 52 At4g12310 826840 CYP706A5 member of CYP706A C.G. S.X.
0.02 2e-4 48 At3g61880 825361 CYP78A9 (CYTOCHROME P450 78A9) Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis. C.G. S.X.
0.07 3e-3 44 At4g22690 828365 CYP706A1 member of CYP706A C.G. S.X.
0.09 3e-3 44 At4g22710 828367 CYP706A2 member of CYP706A C.G. S.X.
0.03 5e-2 40 At5g06900 830580 CYP93D1 member of CYP93D C.G. S.X.
0.01 2e-1 38 At5g14160 831266 F-box family protein F:unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-2 42 Glycine max Gma.2227.1.S1_at BE610649 - - 1e-4 At4g12320 CYP706A6 C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HO09D01S_at HO09D01S - - 2e-1 Atmg00990 - C.G. S.X.
0.02 2e+0 36 Oryza sativa OsAffx.4291.1.S1_at - - - 0 C.G. S.X.
0.07 2e-8 61 Populus trichocarpa PtpAffx.225200.1.S1_at pmrna44362 hypothetical protein - 1e-6 At4g12310 CYP706A5 C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.81185.1.S1_at CA688776 - - 2e+1 At3g27060 TSO2 (TSO meaning 'ugly' in Chinese) C.G. S.X.
0.02 6e-2 38 Vitis vinifera 1610325_at CA817476 hypothetical LOC100241660 - 5e+0 At5g17795 unknown protein C.G. S.X.
0.01 1e+0 34 Zea mays Zm.12105.1.A1_at BM380148 ATP-dependent transporter YFL028C - 2e-6 At1g03905 ABC transporter family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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