Gene omics information

Query gene ID At4g11880
Gene name AGL14 (agamous-like 14)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8190.4At4g11880826795AGL14 (agamous-like 14)AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.S.X.H.G.
0.6176.7At5g67430836879GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PBAS.X.H.G.
0.5469.5At1g51830841610ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAS.X.H.G.
0.5267.4At1g51840841611protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.4659.8At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFS.X.H.G.
0.4457.2At2g308408176352-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseS.X.H.G.
0.4253.9At1g31060839992unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.4253.9At1g53990841837GLIP3Contains lipase signature motif and GDSL domain.S.X.H.G.
0.4152.4At3g44540823579FAR4 (FATTY ACID REDUCTASE 4)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBPOFS.X.H.G.
0.4050.8At2g46750819288FAD-binding domain-containing proteinF:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOPFMAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
266.7100.0GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
172.1100.0GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
159.199.9GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
132.199.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
113.599.9GSM131293AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
75.699.9GSM131289AtGen_6-2221_Osmoticstress-Roots-1.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
72.399.9GSM131294AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
64.099.8GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
61.499.8GSM131298AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
55.599.8GSM131246AtGen_6-0822_Control-Roots-4.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.631e-49196At4g22950828394AGL19 (AGAMOUS-LIKE 19)MADS-box protein AGL19C.G.S.X.
0.238e-36151At2g45660819174AGL20 (AGAMOUS-LIKE 20)Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.C.G.S.X.
0.134e-22105At5g62165836337AGL42 (AGAMOUS LIKE 42)Encodes a MADS box transcription factor. Expressed in quiescent center.C.G.S.X.
0.119e-1167At5g15800831436SEP1 (SEPALLATA1)Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.C.G.S.X.
0.159e-1167At4g09960826586STK (SEEDSTICK)a MADS box transcription factor expressed in the carpel and ovulesC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.212e-654Glycine maxGma.16618.1.S1_atBE330897SOC1-4e-12At2g45660AGL20 (AGAMOUS-LIKE 20)C.G.S.X.
0.036e-134Hordeum vulgareHVSMEa0006A18r2_atHVSMEa0006A18r2--1e+0At4g11880AGL14 (agamous-like 14)C.G.S.X.
0.071e-242Oryza sativaOsAffx.12568.1.S1_at---0C.G.S.X.
0.227e-31135Populus trichocarpaPtpAffx.99434.1.S1_atCV245843hypothetical protein-6e-31At4g11880AGL14 (agamous-like 14)C.G.S.X.
0.101e-344Triticum aestivumTaAffx.19661.2.S1_atCA727417MADS-box transcription factor-8e-4At4g11880AGL14 (agamous-like 14)C.G.S.X.
0.115e-1373Vitis vinifera1615428_atAF373601.1MADS-box protein 2-2e-40At5g15800SEP1 (SEPALLATA1)C.G.S.X.
0.082e-342Zea maysZm.15206.1.A1_atBM268642--6e-18At3g57230AGL16 (AGAMOUS-LIKE 16)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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