Gene omics information

Query gene ID At4g11290
Gene name peroxidase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At4g11290826731peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBS.X.H.G.
0.4355.3At5g57620835866MYB36 (myb domain protein 36)Encodes a putative transcription factor (MYB36).S.X.H.G.
0.3338.1At4g05170825865DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFBOMS.X.H.G.
0.2726.2At1g71740843504unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2624.4At2g32300817791UCC1 (UCLACYANIN 1)Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
166.2100.0GSM266672Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
164.199.9GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
161.099.9GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
156.899.9GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination Study
133.299.9GSM133971Birnbaum_1-1_src5-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
123.899.9GSM266673Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
123.499.9GSM184899Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
122.799.9GSM266674Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
117.299.9GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
87.899.9GSM133973Birnbaum_1-3_src5-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.196e-1685At1g05260837028RCI3 (RARE COLD INDUCIBLE GENE 3)Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.C.G.S.X.
0.055e-446At4g26010828707peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
0.032e-344At2g41480818746electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBMC.G.S.X.
0.038e-342At2g24800817017peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
0.043e-240At5g24070832472peroxidase family proteinF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMC.G.S.X.
0.053e-240At2g34060817967peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMC.G.S.X.
0.033e-240At2g38390818420peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFOC.G.S.X.
0.061e-138At4g36430829795peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to other organism;C:cell wall;PFOBMC.G.S.X.
0.021e-138At3g01190821314peroxidase 27 (PER27) (P27) (PRXR7)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.145e-550Glycine maxGma.16507.1.S1_atAW101606peroxidase /// peroxidase-5e-5At4g11290peroxidase, putativeC.G.S.X.
0.034e+032Hordeum vulgareEBpi05_SQ003_M06_atEBpi05_SQ003_M06--1e+0At1g11980RUB3 (UBIQUITIN-RELATED PROTEIN 3)C.G.S.X.
0.034e+034Oryza sativaOs01g02943009629.m01849--2e+0At4g36430peroxidase, putativeC.G.S.X.
0.071e-242Populus trichocarpaPtpAffx.134095.1.A1_atCV249255hypothetical protein-5e-3At4g11290peroxidase, putativeC.G.S.X.
0.043e-240Triticum aestivumTaAffx.119321.1.S1_x_atBJ277147--1e+0At2g22420peroxidase 17 (PER17) (P17)C.G.S.X.
0.042e+032Vitis vinifera1614059_atCF568794--5e-18At4g21960PRXR1C.G.S.X.
0.048e-134Zea maysZm.3932.1.S1_atBG842197hypothetical protein LOC100191217-3e+0At4g11290peroxidase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00413Link to KaPPA-View 4Peroxidase, class III



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00360Link to KEGG PATHWAYPhenylalanine metabolism
00680Link to KEGG PATHWAYMethane metabolism
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
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