CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g10930

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At4g10930 826692 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MOFBP S.X. H.G.
0.44 57.2 At5g42400 834246 SDG25 (SET DOMAIN PROTEIN 25) F:unknown;P:unknown;C:unknown;MOPFBAV S.X. H.G.
0.40 50.8 At1g76320 843965 FRS4 (FAR1-related sequence 4) F:zinc ion binding;P:response to red or far red light;C:cellular_component unknown;PFM S.X. H.G.
0.14 6.8 At5g13540 - - - S.X. H.G.
0.13 5.8 At4g02560 827904 LD (luminidependens) Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
115.2 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
110.4 99.9 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
109.7 99.9 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
94.4 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.3 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.2 99.9 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
81.1 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
78.7 99.9 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
72.4 99.9 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
71.0 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 4e-1 38 At4g20720 827820 dentin sialophosphoprotein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPAV C.G. S.X.
0.01 4e-1 38 At1g05090 839327 dentin sialophosphoprotein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPAV C.G. S.X.
0.01 2e+0 36 At5g36930 833662 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAV C.G. S.X.
0.01 2e+0 36 At5g28530 832948 FRS10 (FAR1-related sequence 10) F:zinc ion binding;P:response to red or far red light;C:unknown;PFM C.G. S.X.
0.01 2e+0 36 At5g03670 831763 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB C.G. S.X.
0.01 2e+0 36 At5g48940 834952 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
0.01 2e+0 36 At5g04070 830286 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPA C.G. S.X.
0.01 2e+0 36 At4g26300 828736 emb1027 (embryo defective 1027) F:nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding;P:embryonic development ending in seed dormancy, arginyl-tRNA aminoacylation;C:mitochondrion, chloroplast;OBMAFPV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-2 42 Glycine max Gma.4767.1.A1_at AW310163 - - 4e-3 At4g10930 unknown protein C.G. S.X.
0.01 7e-1 36 Hordeum vulgare Contig2575_s_at Contig2575 - - 2e-1 At4g27540 PRA1.H (PRENYLATED RAB ACCEPTOR 1.H) C.G. S.X.
0.01 3e+0 36 Oryza sativa Os07g0671100 AU223140 - Conserved hypothetical protein 3e+0 At3g51200 auxin-responsive family protein C.G. S.X.
0.09 2e-12 75 Populus trichocarpa PtpAffx.200361.1.S1_at pmrna722 hypothetical protein - 1e-12 At4g10930 unknown protein C.G. S.X.
0.01 4e-1 38 Triticum aestivum Ta.13778.2.A1_at CA636212 - - 1e+0 Atcg00510 - C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1607225_at CB914105 hypothetical protein LOC100264253 - 1e-3 At1g75050 - C.G. S.X.
0.01 6e-1 36 Zea mays Zm.1317.1.A1_at CF634693 signal recognition particle 19 kDa protein - 6e+0 At2g40060 protein binding / structural molecule C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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