Gene omics information

Query gene ID At4g10480
Gene name nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At4g10480826640nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABVS.X.H.G.
0.5065.3At2g3206081776640S ribosomal protein S12 (RPS12C)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, nucleus;MOAFPS.X.H.G.
0.4659.8At1g48630841284RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.S.X.H.G.
0.4050.8At4g2941082906260S ribosomal protein L28 (RPL28C)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MPFOS.X.H.G.
0.3541.6At2g36620818234RPL24A (ribosomal protein L24)RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.699.8GSM252665Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
15.299.4GSM252687Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activity
13.099.4GSM252676Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activity
12.999.3GSM252689Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
12.899.3GSM133977Birnbaum_1-7_StageI-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
12.899.3GSM252669Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
12.699.3GSM252686Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
12.599.3GSM265426Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.499.3GSM265418Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.299.3E-MEXP-849-raw-cel-1181981030
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.637e-33141At1g33040840199NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.302e-1789At3g49470824109NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPAVBC.G.S.X.
0.151e-654At3g12390820418nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeF:unknown;P:response to salt stress;C:cytosolic ribosome;MOFBPVAC.G.S.X.
0.022e-550At1g49920841415zinc finger protein-relatedF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.038e-548At4g36980829852unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVBC.G.S.X.
0.051e-344At3g50550824219unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.311e-22107Glycine maxGmaAffx.91307.1.S1_s_atCF807032--8e-23At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.154e-857Hordeum vulgareContig2590_atContig2590--4e-32At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.106e-446Oryza sativaOs05g0373700AB110178.1-Alpha NAC/1.9.2. protein (Nascentpolypeptide-associated complex alpha polypeptide)(Alpha-NAC, non-muscle form)6e-25At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.351e-22107Populus trichocarpaPtp.5853.1.S1_atCK088361hypothetical protein-1e-22At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.164e-1375Triticum aestivumTa.2097.1.S1_x_atCA719770--2e-32At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.218e-24109Vitis vinifera1616748_atCF215206hypothetical protein LOC100246856-2e-37At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.171e-1169Zea maysZm.15829.1.A1_atAY103873.1nascent polypeptide-associated complex alpha subunit-like protein-5e-35At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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