Gene omics information

Query gene ID At4g10390
Gene name protein kinase family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4761.2At4g10390826631protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:response to wounding;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.4355.3At2g46510819262ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.S.X.H.G.
0.4050.8At5g53750835456-F:molecular_function unknown;P:response to wounding;C:cellular_component unknown;PS.X.H.G.
0.3846.7At1g32640840158MYC2Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue light–mediated photomorphogenic growth and blue and far-red-light–regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.S.X.H.G.
0.3846.7At1g74950843834TIFY10BF:molecular_function unknown;P:response to jasmonic acid stimulus, response to wounding;C:cellular_component unknown;PS.X.H.G.
0.3032.1At1g44350841026ILL6encodes a protein similar to IAA amino acid conjugate hydrolase.S.X.H.G.
0.3032.1At2g42760818876unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFS.X.H.G.
0.2930.3At2g06050815160OPR3 (OPDA-REDUCTASE 3)Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.S.X.H.G.
0.2319.3At4g08170826367inositol 1,3,4-trisphosphate 5/6-kinase family proteinF:magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity;P:response to wounding;C:nucleus, cytoplasm;PMOBS.X.H.G.
0.1811.4At1g61890842485MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.099.9GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
89.899.9GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
74.899.9GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
72.199.9GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
62.699.8GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
59.999.8GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
58.299.8GSM152135Col-0 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.559e-86317At1g33260840220protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.013e-240At3g42850823331galactokinase, putativeF:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOMFPAC.G.S.X.
0.033e-240At1g27190839608leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:nucleus, plasma membrane;PMOBFVAC.G.S.X.
0.021e-138At1g32320840124ATMKK10member of MAP Kinase KinaseC.G.S.X.
0.015e-136At5g35390833500leucine-rich repeat transmembrane protein kinase, putativeEncodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.C.G.S.X.
0.015e-136At3g20350821579unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane;MOFBPAVC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-136Glycine maxPsAffx.C51000045_atPsAffx.C51000045--2e+0At4g1500060S ribosomal protein L27 (RPL27C)C.G.S.X.
0.034e+032Hordeum vulgareHZ64G18r_atHZ64G18r--2e+0At4g10390protein kinase family proteinC.G.S.X.
0.024e+034Oryza sativaOs04g06569009632.m05474--1e+0At5g25990unknown proteinC.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.204727.1.S1_atpmrna9311hypothetical protein-2e-1At4g10390protein kinase family proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.93166.1.A1_x_atBJ227097--3e+0At5g05120zinc finger (C2H2 type) family proteinC.G.S.X.
0.036e-134Vitis vinifera1611113_atCF215815hypothetical protein LOC100262993-8e-15At4g06599ubiquitin family proteinC.G.S.X.
0.021e+130Zea maysZmAffx.793.1.A1_atAI770322--8e-1At1g64890integral membrane transporter family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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