Gene omics information

Query gene ID At4g10020
Gene name AtHSD5 (hydroxysteroid dehydrogenase 5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7083.5At4g10020826593AtHSD5 (hydroxysteroid dehydrogenase 5)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVS.X.H.G.
0.9296.0At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.9296.0At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8994.6At3g05260819690short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.8894.0At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8693.1At3g12960820482unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8391.4At4g21020827849late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVAS.X.H.G.
0.8290.9At5g42290834234transcription activator-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.8290.9At3g11050820276ATFER2 (ferritin 2)F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAFS.X.H.G.
0.8089.8At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
457.0100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
363.9100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
352.1100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
332.2100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
291.2100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
287.2100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
248.4100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
244.3100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
243.8100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
242.1100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.062e-344At3g47360823890AtHSD3 (hydroxysteroid dehydrogenase 3)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVC.G.S.X.
0.044e-240At3g47350823889short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVC.G.S.X.
0.031e-138At5g50770835149AtHSD6 (hydroxysteroid dehydrogenase 6)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVC.G.S.X.
0.016e-136At5g42270834232VAR1 (VARIEGATED 1)VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.C.G.S.X.
0.016e-136At5g49110834970unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVC.G.S.X.
0.016e-136At4g27300828838S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
0.026e-136At3g232555008023unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.026e-136At1g28327839728-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-138Glycine maxGmaAffx.67969.1.S1_atAW395744--8e-2At4g10020AtHSD5 (hydroxysteroid dehydrogenase 5)C.G.S.X.
0.024e+032Hordeum vulgareHVSMEb0011L02r2_x_atHVSMEb0011L02r2--2e+0At5g51810GA20OX2 (GIBBERELLIN 20 OXIDASE 2)C.G.S.X.
0.025e+034Oryza sativaOs03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.266e-1789Populus trichocarpaPtpAffx.221347.1.S1_atpmrna38188hypothetical protein-4e-17At4g10020AtHSD5 (hydroxysteroid dehydrogenase 5)C.G.S.X.
0.026e-136Triticum aestivumTaAffx.80772.1.S1_atCA692757--3e+0At2g01200IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32)C.G.S.X.
0.072e-446Vitis vinifera1615925_atBQ793198hypothetical protein LOC100260124-3e-4At4g10020AtHSD5 (hydroxysteroid dehydrogenase 5)C.G.S.X.
0.021e+034Zea maysZm.7669.1.A1_atBM079429--1e+0At4g20810transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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