Gene omics information

Query gene ID At4g08480
Gene name MAPKKK9
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1710.2At4g08480826407MAPKKK9member of MEKK subfamilyS.X.H.G.
0.2014.4At5g11250830995disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMOBFAVS.X.H.G.
0.1811.4At5g56250835724HAP8 (HAPLESS 8)F:unknown;P:unknown;C:chloroplast;MPOFBS.X.H.G.
0.082.3At2g43850818989ankyrin protein kinase, putative (APK1)F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:chloroplast;MOPBFVAS.X.H.G.
0.051.1At1g12220837775RPS5 (RESISTANT TO P. SYRINGAE 5)Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.699.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
52.899.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
52.599.8GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6701227At4g08500826409MEKK1 (MAP KINASE KINASE KINASE 1)Member of MAP Kinase Kinase gene family. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates AtMEK1.C.G.S.X.
0.460847At4g08470826406MAPKKK10member of MEKK subfamilyC.G.S.X.
0.179e-131468At4g12020826810WRKY19member of MEKK subfamilyC.G.S.X.
0.012e-242At5g40440834042ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)encodes a mitogen-activated protein kinase kinaseC.G.S.X.
0.012e-242At4g23190828418CRK11 (CYSTEINE-RICH RLK11)Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)C.G.S.X.
0.013e-138At5g41000834102YSL4 (YELLOW STRIPE LIKE 4)Arabidopsis thaliana metal-nicotianamine transporter YSL4C.G.S.X.
0.013e-138At3g50270824189transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFC.G.S.X.
0.013e-138At3g01920821220yrdC family proteinF:unknown;P:biological_process unknown;C:unknown;BOAMFPC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.094e-757Glycine maxGmaAffx.80668.1.S1_atBE347984--1e-7At4g08500MEKK1 (MAP KINASE KINASE KINASE 1)C.G.S.X.
0.036e-136Hordeum vulgareContig14854_atContig14854--8e-1At4g08480MAPKKK9C.G.S.X.
0.039e-344Oryza sativaOs04g03398009632.m02550-Protein kinase family protein2e-1At4g08470MAPKKK10C.G.S.X.
0.054e-448Populus trichocarpaPtpAffx.222267.1.S1_atpmrna39568hypothetical protein-4e-7At4g08470MAPKKK10C.G.S.X.
0.031e+036Triticum aestivumTa.4348.2.S1_atCA497595--8e-1At4g08480MAPKKK9C.G.S.X.
0.044e-1375Vitis vinifera1617387_atBQ793951--3e-15At4g08500MEKK1 (MAP KINASE KINASE KINASE 1)C.G.S.X.
0.025e-136Zea maysZmAffx.55.1.A1_atAI665054--3e+0At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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