Gene omics information

Query gene ID At4g08140
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2014.4At4g08140826362-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.3235.7At5g63340836454unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2930.3At1g431403767291ubiquitin protein ligase bindingF:ubiquitin protein ligase binding;P:ubiquitin-dependent protein catabolic process;C:endomembrane system, cullin-RING ubiquitin ligase complexS.X.H.G.
0.2522.6At1g32570840151unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.1912.7At2g05950815148transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1156.1100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
849.0100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
557.6100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
324.2100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
225.3100.0E-MEXP-509-raw-cel-829148597
202.9100.0E-MEXP-509-raw-cel-829148561
124.899.9E-MEXP-509-raw-cel-829148525
122.899.9E-MEXP-509-raw-cel-829148348
120.099.9E-MEXP-509-raw-cel-829148201
96.699.9E-MEXP-509-raw-cel-829148456
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.169e-89325At2g20580816580RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A)encoding the RPN subunits of the 26S proteasomeC.G.S.X.
0.141e-446At4g28470828964RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B)encoding the RPN subunits of the 26S proteasomeC.G.S.X.
0.023e-238At1g30010839880intron maturase, type II family proteinF:RNA binding, RNA-directed DNA polymerase activity;P:RNA-dependent DNA replication, RNA splicing;C:unknown;BPOFAMVC.G.S.X.
0.021e-136At5g25300832602-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMC.G.S.X.
0.015e-134At5g47020834748glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAC.G.S.X.
0.012e+032At5g20420832164CHR42 (chromatin remodeling 42)F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;MFBOPAVC.G.S.X.
0.072e+032At5g50810835153TIM8Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.C.G.S.X.
0.022e+032At5g36890833656BGLU42 (BETA GLUCOSIDASE 42)F:cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellulose catabolic process, carbohydrate metabolic process;C:unknown;BOPMFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.067e-134Glycine maxHgAffx.24097.1.S1_atBF013752--6e-1At4g08140-C.G.S.X.
0.041e+128Hordeum vulgareHVSMEn0025G16r2_atHVSMEn0025G16r2--3e-7At5g17050UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)C.G.S.X.
0.044e+032Oryza sativaOsAffx.3365.1.S1_s_at---0C.G.S.X.
0.043e+032Populus trichocarpaPtp.4445.1.S1_s_atBU868960hypothetical protein-2e-36At3g11500small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putativeC.G.S.X.
0.055e-134Triticum aestivumTa.26860.1.A1_atCD491488--1e+0At4g08140-C.G.S.X.
0.052e+030Vitis vinifera1616497_atCB981932hypothetical protein LOC100262039-2e-1At1g04260MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7)C.G.S.X.
0.043e+030Zea maysZm.9908.1.A1_atCF054801hypothetical protein LOC100277932-1e-37At1g22840CYTC-1 (CYTOCHROME C-1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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